Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BPEOMKDE_32 | 151190 | 150486 | WalR | 1.28e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BPEOMKDE_47 | 13913 | 14110 | CspR | 9.36e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BPEOMKDE_1 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_2 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_3 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_4 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_5 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_6 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_7 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_8 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_9 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_10 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_12 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_13 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_14 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_15 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_16 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_17 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_18 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_19 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_20 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_21 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_22 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_23 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_24 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_25 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_26 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_27 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_28 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_29 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_30 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_31 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_32 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_33 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_34 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_35 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_36 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_37 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_38 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_39 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_40 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_41 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_42 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_43 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_44 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_45 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_46 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_47 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_48 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_49 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_50 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_51 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_52 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_53 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_54 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_55 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_56 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_57 | 0.0 | 1.0 | 0.0 |
| BPEOMKDE_61 | 1.0 | 0.0 | 1.0 |
| BPEOMKDE_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BPEOMKDE_34 | 16155 | 26320 | False | Siphoviridae | VOG4632, VOG4609, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
| BPEOMKDE_47 | 34059 | 64323 | False | Siphoviridae | VOG8241, VOG1309, VOG0186, VOG4566, VOG0189, VOG9860, VOG0536, VOG4567, VOG0152, VOG3643, VOG3643, VOG0198, VOG4570, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017 |
| BPEOMKDE_53 | 38508 | 66023 | False | Siphoviridae | VOG1292, VOG0275, VOG6495, VOG8294, VOG0703, VOG0753, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195 |
| BPEOMKDE_57 | 2223 | 37776 | False | Siphoviridae | VOG0703, VOG7017, VOG0861, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10303, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG0531, VOG4549, VOG10904, VOG4570, VOG0198, VOG0044, VOG9759, VOG0327, VOG4606, VOG6545, VOG4548, VOG0322, VOG0321, VOG3642, VOG4967, VOG10867, VOG0181, VOG0707, VOG10397, VOG7236 |
Phigaro v2.4.0 (Database: Jan. 2024 release)