Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BHDKJAKB_41 | 9630 | 8926 | WalR | 2.90e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BHDKJAKB_14 | 32141 | 31944 | CspR | 4.36e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BHDKJAKB_1 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_2 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_3 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_4 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_5 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_6 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_7 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_8 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_9 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_10 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_11 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_12 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_13 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_14 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_15 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_16 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_17 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_18 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_19 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_20 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_21 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_22 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_23 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_24 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_25 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_26 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_27 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_28 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_29 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_30 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_31 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_32 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_33 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_34 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_35 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_36 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_37 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_38 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_39 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_40 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_41 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_42 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_43 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_45 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_46 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_47 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_48 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_49 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_52 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_54 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_55 | 0.0 | 1.0 | 0.0 |
| BHDKJAKB_56 | 1.0 | 0.0 | 1.0 |
| BHDKJAKB_57 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BHDKJAKB_8 | 43219 | 51219 | False | Siphoviridae | VOG10867, VOG4799, VOG0189, VOG0982, VOG5280, VOG5317, VOG3307, VOG0198 |
| BHDKJAKB_14 | 2514 | 8576 | False | Unknown | VOG0536, VOG9860, VOG0226, VOG4855, VOG0186, VOG1309, VOG8241 |
| BHDKJAKB_14 | 293113 | 304346 | False | Siphoviridae | VOG7581, VOG6463, VOG4552, VOG0513, VOG0181, VOG10867, VOG4967, VOG3642, VOG0685, VOG0283, VOG0514, VOG0226, VOG4799, VOG0025, VOG7735, VOG7018, VOG0536, VOG2820 |
| BHDKJAKB_55 | 441 | 22809 | False | Siphoviridae | VOG0198, VOG6579, VOG4570, VOG0796, VOG4544, VOG5821, VOG7554, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599 |
Phigaro v2.4.0 (Database: Jan. 2024 release)