Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OJNAFBAG_49 | 211564 | 210860 | WalR | 2.50e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| OJNAFBAG_31 | 16786 | 16983 | CspR | 2.10e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OJNAFBAG_50 | 36260 | 37318 | repUS75 | 1059 / 1059 | 93.30 | CP002393 |
| OJNAFBAG_61 | 29 | 527 | repUS54 | 500 / 690 | 84.80 | EU185047 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OJNAFBAG_1 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_2 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_3 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_4 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_5 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_6 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_7 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_8 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_9 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_10 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_11 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_12 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_13 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_14 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_16 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_17 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_18 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_19 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_20 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_22 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_23 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_24 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_25 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_26 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_27 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_28 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_29 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_30 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_31 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_32 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_33 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_34 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_35 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_36 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_37 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_38 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_39 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_40 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_41 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_42 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_43 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_44 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_45 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_46 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_47 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_48 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_49 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_50 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_51 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_52 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_53 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_54 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_55 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_57 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_58 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_59 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_60 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_61 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_62 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_63 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_64 | 0.0 | 1.0 | 0.0 |
| OJNAFBAG_65 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_66 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_67 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_72 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_74 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_75 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_76 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_77 | 1.0 | 0.0 | 1.0 |
| OJNAFBAG_78 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OJNAFBAG_31 | 37555 | 70734 | False | Siphoviridae | VOG1309, VOG0186, VOG4566, VOG0226, VOG9860, VOG0536, VOG0152, VOG3643, VOG7530, VOG0198, VOG1315, VOG4403, VOG4570, VOG3699, VOG4544, VOG0720, VOG4564, VOG5616, VOG1300, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG1637, VOG0703, VOG4918 |
| OJNAFBAG_49 | 277497 | 288215 | False | Siphoviridae | VOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)