Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BBEPMCLI_95 | 6454 | 5750 | WalR | 2.83e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| BBEPMCLI_38 | 13968 | 14165 | CspR | 5.50e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BBEPMCLI_1 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_2 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_3 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_4 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_5 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_6 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_7 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_8 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_9 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_10 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_11 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_12 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_13 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_14 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_15 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_16 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_17 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_18 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_19 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_20 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_21 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_22 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_24 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_25 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_26 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_27 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_28 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_29 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_30 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_31 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_32 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_33 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_34 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_35 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_36 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_38 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_39 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_40 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_41 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_42 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_43 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_44 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_45 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_46 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_47 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_48 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_49 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_50 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_51 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_52 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_53 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_54 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_55 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_56 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_57 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_58 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_59 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_60 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_61 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_62 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_63 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_64 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_65 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_66 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_67 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_68 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_69 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_70 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_71 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_72 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_73 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_74 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_75 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_76 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_77 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_78 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_79 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_80 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_81 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_83 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_85 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_86 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_87 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_88 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_89 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_90 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_91 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_92 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_93 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_94 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_95 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_96 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_97 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_98 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_99 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_100 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_102 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_103 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_104 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_105 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_106 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_107 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_108 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_109 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_110 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_111 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_112 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_113 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_114 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_115 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_116 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_117 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_118 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_120 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_121 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_123 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_124 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_126 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_128 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_129 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_130 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_131 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_132 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_135 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_136 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_137 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_141 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_142 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_143 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_144 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_146 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_147 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_149 | 0.0 | 1.0 | 0.0 |
| BBEPMCLI_150 | 1.0 | 0.0 | 1.0 |
| BBEPMCLI_151 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BBEPMCLI_25 | 2051 | 27541 | False | Siphoviridae | VOG4549, VOG6947, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG10868, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017, VOG0602, VOG4649 |
| BBEPMCLI_78 | 34595 | 56263 | False | Siphoviridae | VOG4918, VOG0703, VOG1637, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG5852, VOG4586, VOG0704, VOG0539, VOG4589, VOG0562, VOG4553, VOG4573, VOG4556, VOG4844, VOG4841, VOG10904 |
| BBEPMCLI_80 | 4788 | 7226 | False | Unknown | VOG7735, VOG0025 |
Phigaro v2.4.0 (Database: Jan. 2024 release)