Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EAAFJCEB_47 | 219371 | 218667 | WalR | 2.03e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| EAAFJCEB_25 | 13920 | 14117 | CspR | 2.03e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EAAFJCEB_1 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_2 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_3 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_4 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_5 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_6 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_7 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_9 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_10 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_11 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_12 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_13 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_14 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_15 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_16 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_17 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_18 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_19 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_20 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_21 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_22 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_23 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_24 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_25 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_26 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_27 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_28 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_29 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_30 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_31 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_32 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_33 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_34 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_36 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_37 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_38 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_39 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_40 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_41 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_42 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_43 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_44 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_45 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_46 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_47 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_48 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_49 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_50 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_51 | 0.0 | 1.0 | 0.0 |
| EAAFJCEB_52 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_53 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_58 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_59 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_60 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_61 | 1.0 | 0.0 | 1.0 |
| EAAFJCEB_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EAAFJCEB_26 | 25927 | 56118 | False | Siphoviridae | VOG0152, VOG3643, VOG0044, VOG1563, VOG0198, VOG4570, VOG3699, VOG4544, VOG0720, VOG4564, VOG1345, VOG5616, VOG1300, VOG4555, VOG3434, VOG1887, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7888, VOG0054, VOG4918, VOG0249, VOG4605 |
Phigaro v2.4.0 (Database: Jan. 2024 release)