Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| GDPOMNHD_60 | 6592 | 7527 | rep28 | 936 / 936 | 100.00 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GDPOMNHD_1 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_2 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_3 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_13 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_18 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_19 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_20 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_21 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_22 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_23 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_24 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_25 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_26 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_27 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_28 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_29 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_30 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_31 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_32 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_33 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_34 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_35 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_36 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_37 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_38 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_39 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_40 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_41 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_42 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_43 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_44 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_45 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_46 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_47 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_48 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_49 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_50 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_51 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_52 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_53 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_54 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_55 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_56 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_57 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_58 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_59 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_60 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_61 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_62 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_63 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_64 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_65 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_66 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_67 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_68 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_69 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_70 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_71 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_72 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_73 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_74 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_75 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_76 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_77 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_78 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_79 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_80 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_81 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_82 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_83 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_84 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_85 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_86 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_87 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_88 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_89 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_91 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_92 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_93 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_94 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_95 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_96 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_97 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_98 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_99 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_100 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_101 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_102 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_103 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_104 | 0.0 | 1.0 | 0.0 |
| GDPOMNHD_105 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_106 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_107 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_108 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_109 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_110 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_111 | 1.0 | 0.0 | 1.0 |
| GDPOMNHD_113 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GDPOMNHD_37 | 15123 | 23754 | False | Myoviridae / Siphoviridae | VOG10125, VOG4555, VOG4548, VOG6085, VOG6396, VOG4410 |
| GDPOMNHD_37 | 56115 | 67648 | True | Myoviridae | VOG5088, VOG5088, VOG5088, VOG0026, VOG9629, VOG0020, VOG0583, VOG0189 |
| GDPOMNHD_43 | 5561 | 11134 | False | Myoviridae | VOG0226, VOG0384 |
Phigaro v2.4.0 (Database: Jan. 2024 release)