Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MHJDDCMB_13 | 11052 | 11756 | WalR | 1.05e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MHJDDCMB_5 | 43065 | 43262 | CspR | 3.94e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MHJDDCMB_1 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_2 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_3 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_4 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_5 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_6 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_7 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_8 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_9 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_10 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_11 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_12 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_13 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_14 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_15 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_16 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_17 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_18 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_19 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_20 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_21 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_22 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_23 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_24 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_25 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_26 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_27 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_28 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_29 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_30 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_31 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_32 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_33 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_34 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_36 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_37 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_38 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_39 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_40 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_41 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_42 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_43 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_44 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_45 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_46 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_47 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_48 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_49 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_50 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_51 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_52 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_53 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_54 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_55 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_56 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_57 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_58 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_59 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_60 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_61 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_62 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_63 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_64 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_65 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_66 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_67 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_68 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_69 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_70 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_71 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_72 | 1.0 | 0.0 | 1.0 |
| MHJDDCMB_73 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_74 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_75 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_76 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_77 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_78 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_79 | 0.0 | 1.0 | 0.0 |
| MHJDDCMB_80 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MHJDDCMB_5 | 65778 | 70581 | False | Unknown | VOG1309, VOG0186, VOG4566, VOG0226, VOG11003, VOG9667 |
| MHJDDCMB_9 | 1033 | 27647 | False | Siphoviridae | VOG6131, VOG3643, VOG3643, VOG0198, VOG4570, VOG10904, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0054, VOG4918 |
| MHJDDCMB_12 | 19641 | 42045 | False | Siphoviridae | VOG0275, VOG6495, VOG8294, VOG0703, VOG0753, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202 |
| MHJDDCMB_77 | 62977 | 75611 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG4609, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)