Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| APNKFGGK_12 | 144994 | 146212 | mef(A) | Erythromycin, Azithromycin | 94.75 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APNKFGGK_12 | 145154 | 146215 | mef(A) | macrolide efflux MFS transporter Mef(A) | INTERNAL_STOP | 98.59 | 86.76 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| APNKFGGK_91 | 530 | 1209 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APNKFGGK_1 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_2 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_3 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_4 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_5 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_6 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_7 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_8 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_9 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_10 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_11 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_12 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_13 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_14 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_15 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_16 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_17 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_18 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_19 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_20 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_21 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_22 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_23 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_24 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_25 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_26 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_27 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_28 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_29 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_30 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_31 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_32 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_33 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_34 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_35 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_36 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_37 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_38 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_39 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_40 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_41 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_42 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_43 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_44 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_45 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_46 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_47 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_48 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_49 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_50 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_51 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_52 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_53 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_54 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_55 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_56 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_57 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_58 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_59 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_60 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_61 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_62 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_63 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_64 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_65 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_66 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_67 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_68 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_69 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_70 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_71 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_72 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_73 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_74 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_75 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_76 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_77 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_78 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_79 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_80 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_81 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_82 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_83 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_84 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_85 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_86 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_87 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_89 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_90 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_91 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_92 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_93 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_94 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_95 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_96 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_97 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_98 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_99 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_100 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_101 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_102 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_103 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_104 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_106 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_107 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_108 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_109 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_110 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_111 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_112 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_113 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_114 | 0.0 | 1.0 | 0.0 |
| APNKFGGK_115 | 1.0 | 0.0 | 1.0 |
| APNKFGGK_116 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| APNKFGGK_27 | 47435 | 63264 | False | Siphoviridae | VOG4571, |
Phigaro v2.4.0 (Database: Jan. 2024 release)