Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LKJHGCGM_60 | 394 | 1073 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LKJHGCGM_1 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_2 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_3 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_4 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_5 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_6 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_7 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_8 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_9 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_10 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_11 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_12 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_13 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_14 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_15 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_16 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_17 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_18 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_19 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_20 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_21 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_22 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_23 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_24 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_25 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_26 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_27 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_28 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_29 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_30 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_31 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_32 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_33 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_34 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_35 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_36 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_37 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_38 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_39 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_40 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_41 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_42 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_43 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_44 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_45 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_46 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_47 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_48 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_49 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_50 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_51 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_53 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_54 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_55 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_56 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_57 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_58 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_59 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_60 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_61 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_62 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_63 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_64 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_65 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_66 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_67 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_68 | 1.0 | 0.0 | 1.0 |
| LKJHGCGM_69 | 0.0 | 1.0 | 0.0 |
| LKJHGCGM_70 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LKJHGCGM_1 | 102640 | 115789 | False | Unknown | VOG0377, |
| LKJHGCGM_1 | 287809 | 297801 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)