Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DEMHKHKO_4 | 59134 | 59838 | WalR | 9.53e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| DEMHKHKO_7 | 110857 | 110663 | CspR | 5.20e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| DEMHKHKO_7 | 110857 | 110660 | CspA | 7.97e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DEMHKHKO_75 | 688 | 1623 | rep28 | 936 / 936 | 100.00 | CP005948 |
| DEMHKHKO_59 | 1300 | 2202 | rep38 | 903 / 903 | 100.00 | CP005943 |
| DEMHKHKO_70 | 177 | 1133 | repUS64 | 958 / 954 | 92.17 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DEMHKHKO_1 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_2 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_3 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_4 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_5 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_6 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_7 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_8 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_9 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_10 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_11 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_12 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_13 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_14 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_15 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_16 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_17 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_18 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_19 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_20 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_21 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_22 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_23 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_24 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_25 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_26 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_27 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_28 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_29 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_30 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_31 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_32 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_33 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_34 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_35 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_36 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_37 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_38 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_39 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_40 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_41 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_42 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_43 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_44 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_45 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_46 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_47 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_48 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_49 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_50 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_51 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_52 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_53 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_54 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_55 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_57 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_58 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_59 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_60 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_61 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_62 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_63 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_64 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_65 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_66 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_67 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_68 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_69 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_70 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_71 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_72 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_73 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_74 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_75 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_76 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_78 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_79 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_80 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_81 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_82 | 0.0 | 1.0 | 0.0 |
| DEMHKHKO_83 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_84 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_85 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_86 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_87 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_88 | 1.0 | 0.0 | 1.0 |
| DEMHKHKO_89 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DEMHKHKO_24 | 18552 | 36363 | False | Siphoviridae | VOG2687, VOG4632, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556, VOG4568, VOG0204, VOG0198, VOG0275, VOG7508 |
| DEMHKHKO_33 | 4064 | 24099 | False | Siphoviridae | VOG5616, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1320, VOG9583, VOG0724, VOG0799, VOG0725, VOG4545, VOG4633, VOG4828, VOG4619, VOG4856, VOG9640, VOG0804 |
| DEMHKHKO_34 | 3879 | 25751 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG0577, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG1049, VOG3643, VOG0044, VOG10015 |
Phigaro v2.4.0 (Database: Jan. 2024 release)