Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KCEJEKCG_8 | 44265 | 43561 | WalR | 5.70e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| KCEJEKCG_3 | 52789 | 52983 | CspR | 7.22e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| KCEJEKCG_3 | 52789 | 52986 | CspA | 1.11e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KCEJEKCG_52 | 889 | 1824 | rep28 | 936 / 936 | 100.00 | CP005948 |
| KCEJEKCG_56 | 2922 | 3824 | rep38 | 903 / 903 | 100.00 | CP005943 |
| KCEJEKCG_73 | 508 | 1150 | repUS64 | 644 / 954 | 95.81 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KCEJEKCG_1 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_2 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_3 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_4 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_5 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_6 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_7 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_8 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_9 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_10 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_11 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_12 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_13 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_14 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_15 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_16 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_17 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_18 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_19 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_20 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_21 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_22 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_23 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_24 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_25 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_26 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_27 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_28 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_29 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_30 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_31 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_32 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_33 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_34 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_35 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_36 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_37 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_38 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_39 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_40 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_41 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_42 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_43 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_44 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_45 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_46 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_47 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_48 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_49 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_50 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_51 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_52 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_53 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_54 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_55 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_56 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_57 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_58 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_60 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_61 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_62 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_63 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_64 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_65 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_66 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_67 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_68 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_69 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_70 | 0.0 | 1.0 | 0.0 |
| KCEJEKCG_71 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_72 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_73 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_74 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_75 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_76 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_77 | 1.0 | 0.0 | 1.0 |
| KCEJEKCG_78 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KCEJEKCG_5 | 1550 | 28835 | False | Siphoviridae | VOG4566, VOG0189, VOG11024, VOG4693, VOG5258, VOG4567, VOG10015, VOG0044, VOG3643, VOG1049, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG10957 |
| KCEJEKCG_11 | 18584 | 37109 | False | Siphoviridae | VOG2687, VOG4632, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556, VOG4568, VOG0204, VOG0198, VOG0275, VOG7508, VOG4602, VOG9667 |
| KCEJEKCG_11 | 44126 | 69931 | False | Siphoviridae | VOG5616, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG4713, VOG1320, VOG9583, VOG0724, VOG0799, VOG0725, VOG4545, VOG4633, VOG4828, VOG4619, VOG4856, VOG9640, VOG0804, VOG4705, VOG9955, VOG4705, VOG4615 |
Phigaro v2.4.0 (Database: Jan. 2024 release)