Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ACEEOGCB_6 | 59430 | 60134 | WalR | 5.72e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| ACEEOGCB_8 | 6932 | 7126 | CspR | 4.11e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| ACEEOGCB_8 | 6932 | 7129 | CspA | 6.31e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ACEEOGCB_61 | 1239 | 2174 | rep28 | 936 / 936 | 100.00 | CP005948 |
| ACEEOGCB_78 | 1146 | 2048 | rep38 | 903 / 903 | 100.00 | CP005943 |
| ACEEOGCB_102 | 1 | 694 | repUS64 | 695 / 954 | 89.21 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACEEOGCB_1 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_2 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_3 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_4 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_5 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_6 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_7 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_8 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_9 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_10 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_11 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_12 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_13 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_14 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_15 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_16 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_17 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_18 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_19 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_20 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_21 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_22 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_23 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_24 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_25 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_26 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_27 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_28 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_29 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_30 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_31 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_32 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_33 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_34 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_35 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_36 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_37 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_38 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_39 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_40 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_41 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_42 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_43 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_44 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_45 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_46 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_47 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_48 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_49 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_50 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_51 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_52 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_53 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_54 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_55 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_56 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_57 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_58 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_59 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_60 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_61 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_62 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_63 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_64 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_66 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_67 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_68 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_69 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_70 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_71 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_72 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_73 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_74 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_75 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_76 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_77 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_78 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_79 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_80 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_81 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_82 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_83 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_84 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_85 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_86 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_87 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_88 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_89 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_90 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_91 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_92 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_93 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_94 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_95 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_96 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_97 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_98 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_99 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_100 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_101 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_102 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_103 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_104 | 1.0 | 0.0 | 1.0 |
| ACEEOGCB_105 | 0.0 | 1.0 | 0.0 |
| ACEEOGCB_106 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACEEOGCB_27 | 19338 | 37226 | False | Siphoviridae | VOG2687, VOG4632, VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG2935, VOG4556, VOG4568, VOG0204, VOG0198, VOG0275, VOG7508 |
| ACEEOGCB_37 | 2004 | 23980 | False | Siphoviridae | VOG9955, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4828, VOG4633, VOG4545, VOG0725, VOG0799, VOG0724, VOG9583, VOG1320, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5616 |
| ACEEOGCB_38 | 3879 | 26513 | False | Siphoviridae | VOG4626, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG1049, VOG3643, VOG0044 |
Phigaro v2.4.0 (Database: Jan. 2024 release)