Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JEPKIILJ_3 | 113505 | 112801 | WalR | 9.54e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| JEPKIILJ_4 | 53125 | 53319 | CspR | 7.24e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| JEPKIILJ_4 | 53125 | 53322 | CspA | 1.11e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JEPKIILJ_52 | 1123 | 2058 | rep28 | 936 / 936 | 100.00 | CP005948 |
| JEPKIILJ_54 | 2971 | 3873 | rep38 | 903 / 903 | 100.00 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEPKIILJ_1 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_2 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_3 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_4 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_5 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_6 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_7 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_8 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_9 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_10 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_11 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_12 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_13 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_14 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_15 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_16 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_17 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_18 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_19 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_20 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_21 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_22 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_23 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_24 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_25 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_26 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_27 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_28 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_29 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_30 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_31 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_32 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_33 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_34 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_35 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_36 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_37 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_38 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_39 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_40 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_41 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_42 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_43 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_44 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_45 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_46 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_47 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_48 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_49 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_50 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_51 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_52 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_53 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_54 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_55 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_56 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_58 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_59 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_60 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_61 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_62 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_63 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_64 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_65 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_66 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_67 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_68 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_69 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_70 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_71 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_72 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_73 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_74 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_75 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_76 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_77 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_78 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_80 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_81 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_82 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_83 | 0.0 | 1.0 | 0.0 |
| JEPKIILJ_84 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_85 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_86 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_87 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_88 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_89 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_90 | 1.0 | 0.0 | 1.0 |
| JEPKIILJ_92 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEPKIILJ_10 | 22052 | 46758 | False | Siphoviridae | VOG0054, VOG0753, VOG4615, VOG4705, VOG9955, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4828, VOG4633, VOG4545, VOG0725, VOG0799, VOG0724, VOG9583, VOG1320, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5616 |
| JEPKIILJ_10 | 56173 | 74458 | False | Siphoviridae | VOG9667, VOG4602, VOG7508, VOG0275, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
| JEPKIILJ_31 | 2171 | 26128 | False | Siphoviridae | VOG10015, VOG0044, VOG3643, VOG1049, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4605, VOG4599, VOG4626, VOG10957 |
Phigaro v2.4.0 (Database: Jan. 2024 release)