Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EGBGOCPJ_5 | 60270 | 60974 | WalR | 4.96e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EGBGOCPJ_80 | 5472 | 5666 | CspR | 3.21e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EGBGOCPJ_80 | 5472 | 5669 | CspA | 4.92e-31 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EGBGOCPJ_76 | 1206 | 2141 | rep28 | 936 / 936 | 100.00 | CP005948 |
| EGBGOCPJ_108 | 859 | 1815 | repUS64 | 958 / 954 | 92.17 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EGBGOCPJ_1 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_2 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_3 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_4 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_5 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_6 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_7 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_8 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_9 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_10 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_11 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_12 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_13 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_14 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_15 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_16 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_17 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_18 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_19 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_20 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_21 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_22 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_23 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_24 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_25 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_26 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_27 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_28 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_29 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_30 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_31 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_32 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_33 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_34 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_35 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_36 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_37 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_38 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_39 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_40 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_41 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_42 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_43 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_44 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_45 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_46 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_47 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_48 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_49 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_50 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_51 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_52 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_53 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_54 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_55 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_56 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_57 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_58 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_59 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_60 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_61 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_62 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_63 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_64 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_65 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_66 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_67 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_68 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_69 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_70 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_71 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_72 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_73 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_74 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_75 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_76 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_77 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_78 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_79 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_80 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_81 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_82 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_83 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_84 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_85 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_86 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_87 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_88 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_89 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_90 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_91 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_92 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_93 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_94 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_95 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_97 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_98 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_99 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_100 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_101 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_102 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_103 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_104 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_105 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_107 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_108 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_109 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_112 | 0.0 | 1.0 | 0.0 |
| EGBGOCPJ_113 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_114 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_115 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_116 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_117 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_118 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_120 | 1.0 | 0.0 | 1.0 |
| EGBGOCPJ_122 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EGBGOCPJ_4 | 4526 | 34700 | False | Siphoviridae | VOG10957, VOG4599, VOG4605, VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG1049, VOG3643, VOG0044, VOG10015, VOG4567, VOG5258, VOG4693, VOG11024, VOG0189, VOG4566, VOG0514, VOG6545, VOG0322, VOG0685 |
| EGBGOCPJ_14 | 5380 | 29688 | False | Siphoviridae | VOG9955, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4828, VOG4633, VOG4545, VOG0725, VOG0799, VOG0724, VOG9583, VOG1320, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5616 |
| EGBGOCPJ_14 | 37923 | 56577 | False | Siphoviridae | VOG4602, VOG7508, VOG0275, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
Phigaro v2.4.0 (Database: Jan. 2024 release)