Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EOJJAIFD_8 | 59346 | 60050 | WalR | 5.72e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EOJJAIFD_6 | 6932 | 7126 | CspR | 5.22e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EOJJAIFD_6 | 6932 | 7129 | CspA | 8.01e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EOJJAIFD_55 | 1175 | 2110 | rep28 | 936 / 936 | 100.00 | CP005948 |
| EOJJAIFD_56 | 3003 | 3905 | rep38 | 903 / 903 | 100.00 | CP005943 |
| EOJJAIFD_90 | 820 | 1513 | repUS64 | 695 / 954 | 89.21 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EOJJAIFD_1 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_2 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_3 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_4 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_5 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_6 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_7 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_8 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_9 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_10 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_11 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_12 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_13 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_14 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_15 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_16 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_17 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_18 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_19 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_20 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_21 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_22 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_23 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_24 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_25 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_26 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_27 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_28 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_29 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_30 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_31 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_32 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_33 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_34 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_35 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_36 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_37 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_38 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_39 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_40 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_41 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_42 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_43 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_44 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_45 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_46 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_47 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_48 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_49 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_50 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_51 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_52 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_53 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_54 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_55 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_56 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_57 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_58 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_59 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_61 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_62 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_63 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_64 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_65 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_66 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_67 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_68 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_69 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_70 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_71 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_72 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_73 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_74 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_75 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_76 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_77 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_78 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_79 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_80 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_81 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_82 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_83 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_84 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_85 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_86 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_87 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_88 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_89 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_90 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_91 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_92 | 1.0 | 0.0 | 1.0 |
| EOJJAIFD_94 | 0.0 | 1.0 | 0.0 |
| EOJJAIFD_95 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EOJJAIFD_9 | 66689 | 96864 | False | Siphoviridae | VOG0685, VOG0322, VOG6545, VOG0514, VOG4566, VOG0189, VOG11024, VOG4693, VOG5258, VOG4567, VOG10015, VOG0044, VOG3643, VOG1049, VOG0198, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599 |
| EOJJAIFD_11 | 22285 | 48693 | False | Siphoviridae | VOG0054, VOG0753, VOG4615, VOG4705, VOG9955, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4828, VOG4633, VOG4545, VOG0725, VOG0799, VOG0724, VOG9583, VOG1320, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG5616 |
| EOJJAIFD_11 | 55917 | 74868 | False | Siphoviridae | VOG9667, VOG4602, VOG7508, VOG0275, VOG0198, VOG0204, VOG4568, VOG4556, VOG2935, VOG4544, VOG4581, VOG4841, VOG0205, VOG4609, VOG4632 |
Phigaro v2.4.0 (Database: Jan. 2024 release)