Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCLAGGJO_139 | 152800 | 154725 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PCLAGGJO_139 | 152800 | 154725 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PCLAGGJO_139 | 152803 | 154725 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PCLAGGJO_40 | 60 | 739 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PCLAGGJO_1 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_2 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_3 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_4 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_5 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_6 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_7 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_8 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_9 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_10 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_11 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_12 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_13 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_14 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_15 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_16 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_17 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_18 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_19 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_20 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_21 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_22 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_24 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_25 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_26 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_27 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_28 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_29 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_30 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_31 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_32 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_33 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_34 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_35 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_36 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_37 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_44 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_55 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_65 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_76 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_87 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_93 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_94 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_95 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_96 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_97 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_98 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_99 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_100 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_101 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_102 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_103 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_104 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_105 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_106 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_107 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_108 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_109 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_110 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_111 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_112 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_113 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_114 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_115 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_116 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_117 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_118 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_119 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_120 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_121 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_122 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_123 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_124 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_125 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_126 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_127 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_128 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_129 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_130 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_131 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_132 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_133 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_134 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_135 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_136 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_137 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_138 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_139 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_140 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_141 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_142 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_143 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_144 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_145 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_146 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_147 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_148 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_149 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_150 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_151 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_152 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_153 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_154 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_155 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_156 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_157 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_158 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_159 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_160 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_161 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_162 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_163 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_164 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_165 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_166 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_167 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_168 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_169 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_170 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_171 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_172 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_173 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_174 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_175 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_176 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_177 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_178 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_179 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_180 | 1.0 | 0.0 | 1.0 |
| PCLAGGJO_181 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_182 | 0.0 | 1.0 | 0.0 |
| PCLAGGJO_183 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)