Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NJKCLGFL_257 | 16802 | 17767 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
| NJKCLGFL_110 | 8233 | 9438 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| NJKCLGFL_133 | 6574 | 7308 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
| NJKCLGFL_59 | 1480 | 2280 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NJKCLGFL_257 | 16802 | 17767 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
| NJKCLGFL_133 | 6574 | 7308 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
| NJKCLGFL_59 | 1480 | 2280 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NJKCLGFL_257 | 16805 | 17767 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
| NJKCLGFL_133 | 6577 | 7308 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
| NJKCLGFL_110 | 8233 | 9435 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| NJKCLGFL_110 | 9463 | 9972 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| NJKCLGFL_59 | 1483 | 2280 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NJKCLGFL_93 | 49 | 728 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NJKCLGFL_1 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_2 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_3 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_4 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_5 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_6 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_7 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_8 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_9 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_10 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_11 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_12 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_13 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_14 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_15 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_16 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_17 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_18 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_19 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_20 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_21 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_22 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_23 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_24 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_25 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_26 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_27 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_28 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_29 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_30 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_31 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_32 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_33 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_34 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_35 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_36 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_37 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_38 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_39 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_40 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_41 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_42 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_43 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_44 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_46 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_47 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_48 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_49 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_50 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_51 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_52 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_53 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_54 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_55 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_56 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_57 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_58 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_59 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_60 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_61 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_62 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_63 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_64 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_65 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_66 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_67 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_68 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_69 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_70 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_71 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_72 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_73 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_74 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_75 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_76 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_77 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_78 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_79 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_80 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_81 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_82 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_83 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_84 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_86 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_88 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_89 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_90 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_91 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_92 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_93 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_94 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_95 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_99 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_110 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_111 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_122 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_133 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_144 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_155 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_166 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_176 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_177 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_178 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_179 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_180 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_181 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_182 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_183 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_184 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_185 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_186 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_187 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_188 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_189 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_190 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_191 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_192 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_193 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_194 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_195 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_196 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_197 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_198 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_199 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_200 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_201 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_202 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_203 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_204 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_205 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_206 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_207 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_208 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_209 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_210 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_211 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_212 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_213 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_214 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_215 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_216 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_217 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_218 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_219 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_220 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_221 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_222 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_223 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_224 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_225 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_226 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_227 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_228 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_229 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_230 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_231 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_232 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_233 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_234 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_235 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_236 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_237 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_238 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_239 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_240 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_241 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_242 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_243 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_244 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_245 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_246 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_247 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_248 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_249 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_250 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_251 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_252 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_253 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_254 | 1.0 | 0.0 | 1.0 |
| NJKCLGFL_255 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_256 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_257 | 0.0 | 1.0 | 0.0 |
| NJKCLGFL_258 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)