Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFBEEOBE_1 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_2 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_3 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_4 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_5 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_6 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_7 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_8 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_9 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_10 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_11 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_12 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_13 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_14 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_15 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_16 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_17 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_18 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_19 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_20 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_21 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_22 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_23 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_24 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_25 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_26 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_27 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_28 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_29 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_30 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_31 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_33 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_34 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_35 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_36 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_38 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_39 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_40 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_41 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_42 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_43 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_44 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_45 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_47 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_49 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_50 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_51 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_53 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_54 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_55 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_56 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_57 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_58 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_59 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_60 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_61 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_62 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_63 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_64 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_65 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_66 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_67 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_68 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_69 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_70 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_71 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_72 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_73 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_74 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_75 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_78 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_79 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_87 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_91 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_97 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_98 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_99 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_100 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_101 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_102 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_103 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_107 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_108 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_110 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_112 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_114 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_115 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_116 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_117 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_119 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_124 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_128 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_129 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_130 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_133 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_138 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_139 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_144 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_146 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_148 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_154 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_156 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_157 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_159 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_161 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_165 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_168 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_169 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_170 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_174 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_175 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_178 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_181 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_183 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_185 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_187 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_188 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_191 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_202 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_210 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_211 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_222 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_225 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_231 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_240 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_242 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_244 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_250 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_260 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_269 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_279 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_287 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_296 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_303 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_306 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_307 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_316 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_338 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_349 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_358 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_359 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_360 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_361 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_362 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_363 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_364 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_365 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_366 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_367 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_368 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_369 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_370 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_371 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_372 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_373 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_374 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_375 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_376 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_377 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_378 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_379 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_381 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_382 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_384 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_385 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_386 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_387 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_388 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_389 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_390 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_391 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_392 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_393 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_394 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_395 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_396 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_397 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_398 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_400 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_401 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_402 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_403 | 1.0 | 0.0 | 1.0 |
| PFBEEOBE_404 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_405 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_406 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_407 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_410 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_411 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_412 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_413 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_414 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_415 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_416 | 0.0 | 1.0 | 0.0 |
| PFBEEOBE_417 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PFBEEOBE_11 | 7399 | 16675 | False | Myoviridae / Siphoviridae | VOG1353, VOG4710, VOG1942, VOG1915, VOG5027, VOG1912, VOG7407, VOG1154, VOG4618 |
| PFBEEOBE_372 | 21542 | 25003 | False | Myoviridae / Siphoviridae | VOG4566, VOG8288, VOG5458, VOG8288, VOG4799, VOG2228 |
| PFBEEOBE_372 | 58570 | 73670 | False | Myoviridae | VOG8232, VOG0198, VOG0686, VOG0796, VOG7407, VOG1912, VOG5027, VOG4865, VOG1915, VOG6932, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352 |
| PFBEEOBE_401 | 1624 | 28330 | False | Siphoviridae | VOG0198, VOG4841, VOG4581, VOG3349, VOG9438, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG9945, VOG4705, VOG0861 |
| PFBEEOBE_417 | 43480 | 46995 | False | Siphoviridae / Podoviridae | VOG2401, VOG4602, VOG11075, VOG9667, VOG1356, VOG7236 |
| PFBEEOBE_417 | 56807 | 83369 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845 |
Phigaro v2.4.0 (Database: Jan. 2024 release)