Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EOCGHOKO_1 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_2 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_3 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_4 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_5 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_6 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_7 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_8 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_9 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_10 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_11 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_12 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_13 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_14 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_15 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_16 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_17 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_18 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_19 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_20 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_21 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_22 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_23 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_24 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_25 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_26 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_27 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_28 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_29 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_30 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_31 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_32 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_33 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_34 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_35 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_36 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_37 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_38 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_39 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_40 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_41 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_42 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_43 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_44 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_45 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_46 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_47 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_48 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_49 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_50 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_52 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_53 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_54 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_56 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_57 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_58 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_59 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_60 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_61 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_62 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_63 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_64 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_65 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_66 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_67 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_68 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_69 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_70 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_71 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_72 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_73 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_74 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_75 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_76 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_77 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_79 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_90 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_100 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_111 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_112 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_123 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_134 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_145 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_156 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_160 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_162 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_163 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_164 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_166 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_167 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_168 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_172 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_176 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_187 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_190 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_191 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_197 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_202 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_204 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_205 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_207 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_211 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_218 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_219 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_220 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_222 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_229 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_234 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_240 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_242 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_243 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_244 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_251 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_255 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_258 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_259 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_262 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_270 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_272 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_273 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_281 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_283 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_285 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_291 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_294 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_295 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_297 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_298 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_299 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_302 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_308 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_312 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_322 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_323 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_331 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_332 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_348 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_354 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_356 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_363 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_369 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_373 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_384 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_387 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_395 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_404 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_414 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_422 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_423 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_425 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_434 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_442 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_449 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_452 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_461 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_470 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_478 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_488 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_490 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_496 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_497 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_498 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_499 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_500 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_501 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_502 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_503 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_504 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_505 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_506 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_507 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_508 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_509 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_510 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_511 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_512 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_513 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_514 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_515 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_516 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_517 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_518 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_520 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_521 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_522 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_523 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_524 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_525 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_526 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_527 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_528 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_529 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_530 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_531 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_533 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_534 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_535 | 1.0 | 0.0 | 1.0 |
| EOCGHOKO_536 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_537 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_538 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_539 | 0.0 | 1.0 | 0.0 |
| EOCGHOKO_540 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EOCGHOKO_5 | 8159 | 41577 | False | Myoviridae | VOG9945, VOG2170, VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG10904, VOG7237, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG0198 |
| EOCGHOKO_497 | 21175 | 24238 | False | Myoviridae / Siphoviridae | VOG9667, VOG4566, VOG8288, VOG5458, VOG8288, VOG4799, VOG2228 |
| EOCGHOKO_521 | 29088 | 56865 | False | Siphoviridae | VOG6675, VOG0327, VOG3349, VOG0198, VOG4841, VOG4581, VOG3349, VOG9438, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG9945, VOG4705, VOG0861 |
Phigaro v2.4.0 (Database: Jan. 2024 release)