Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GMKBHJMA_1 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_2 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_3 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_4 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_5 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_6 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_7 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_8 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_9 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_10 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_11 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_12 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_13 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_14 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_15 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_16 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_17 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_18 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_19 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_20 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_21 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_22 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_23 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_24 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_25 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_26 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_27 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_28 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_29 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_30 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_31 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_32 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_33 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_34 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_35 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_36 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_37 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_38 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_39 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_40 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_41 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_42 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_43 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_44 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_45 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_46 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_47 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_48 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_49 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_50 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_51 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_52 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_53 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_54 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_55 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_56 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_57 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_58 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_59 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_60 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_68 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_79 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_88 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_97 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_108 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_109 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_120 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_129 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_137 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_147 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_158 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_163 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_164 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_165 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_166 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_167 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_169 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_176 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_178 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_182 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_186 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_187 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_188 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_193 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_197 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_198 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_202 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_204 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_207 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_208 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_209 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_210 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_215 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_218 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_219 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_220 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_226 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_230 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_231 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_233 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_234 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_235 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_239 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_244 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_247 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_249 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_252 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_253 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_254 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_256 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_260 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_261 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_264 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_267 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_271 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_275 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_279 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_280 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_281 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_282 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_288 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_289 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_290 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_291 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_294 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_298 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_299 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_301 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_302 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_303 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_305 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_308 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_314 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_315 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_317 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_323 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_324 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_325 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_326 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_327 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_328 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_329 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_330 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_331 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_332 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_333 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_334 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_335 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_336 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_337 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_338 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_339 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_340 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_341 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_342 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_343 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_344 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_345 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_346 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_347 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_348 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_349 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_350 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_351 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_352 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_353 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_354 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_355 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_356 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_357 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_359 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_360 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_361 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_362 | 1.0 | 0.0 | 1.0 |
| GMKBHJMA_363 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_364 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_365 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_366 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_367 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_368 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_369 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_370 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_371 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_372 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_373 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_374 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_375 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_376 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_377 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_378 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_379 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_380 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_381 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_382 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_383 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_384 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_385 | 0.0 | 1.0 | 0.0 |
| GMKBHJMA_386 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GMKBHJMA_58 | 8159 | 40453 | False | Myoviridae | VOG9945, VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG0198 |
| GMKBHJMA_336 | 21479 | 23851 | False | Siphoviridae | VOG4799, VOG8288, VOG5458, VOG8288, VOG4799 |
| GMKBHJMA_360 | 1549 | 22024 | False | Siphoviridae | VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG9945, VOG4705, VOG0861 |
| GMKBHJMA_386 | 6534 | 18890 | False | Myoviridae / Siphoviridae | VOG9708, VOG2228, VOG4552, VOG8520, VOG8520, VOG4602, VOG0371, VOG0275, VOG4010, VOG2352, VOG2090, VOG4705 |
Phigaro v2.4.0 (Database: Jan. 2024 release)