Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
HNIBNKAG_10.01.00.0
HNIBNKAG_20.01.00.0
HNIBNKAG_30.01.00.0
HNIBNKAG_40.01.00.0
HNIBNKAG_50.01.00.0
HNIBNKAG_60.01.00.0
HNIBNKAG_70.01.00.0
HNIBNKAG_81.00.01.0
HNIBNKAG_90.01.00.0
HNIBNKAG_100.01.00.0
HNIBNKAG_110.01.00.0
HNIBNKAG_120.01.00.0
HNIBNKAG_130.01.00.0
HNIBNKAG_140.01.00.0
HNIBNKAG_151.00.01.0
HNIBNKAG_161.00.01.0
HNIBNKAG_171.00.01.0
HNIBNKAG_180.01.00.0
HNIBNKAG_190.01.00.0
HNIBNKAG_200.01.00.0
HNIBNKAG_210.01.00.0
HNIBNKAG_220.01.00.0
HNIBNKAG_230.01.00.0
HNIBNKAG_250.01.00.0
HNIBNKAG_260.01.00.0
HNIBNKAG_271.00.01.0
HNIBNKAG_281.00.01.0
HNIBNKAG_290.01.00.0
HNIBNKAG_300.01.00.0
HNIBNKAG_310.01.00.0
HNIBNKAG_320.01.00.0
HNIBNKAG_331.00.01.0
HNIBNKAG_341.00.01.0
HNIBNKAG_350.01.00.0
HNIBNKAG_360.01.00.0
HNIBNKAG_370.01.00.0
HNIBNKAG_380.01.00.0
HNIBNKAG_391.00.01.0
HNIBNKAG_401.00.01.0
HNIBNKAG_410.01.00.0
HNIBNKAG_420.01.00.0
HNIBNKAG_430.01.00.0
HNIBNKAG_440.01.00.0
HNIBNKAG_450.01.00.0
HNIBNKAG_460.01.00.0
HNIBNKAG_470.01.00.0
HNIBNKAG_481.00.01.0
HNIBNKAG_490.01.00.0
HNIBNKAG_500.01.00.0
HNIBNKAG_510.01.00.0
HNIBNKAG_520.01.00.0
HNIBNKAG_530.01.00.0
HNIBNKAG_540.01.00.0
HNIBNKAG_550.01.00.0
HNIBNKAG_561.00.01.0
HNIBNKAG_570.01.00.0
HNIBNKAG_580.01.00.0
HNIBNKAG_590.01.00.0
HNIBNKAG_600.01.00.0
HNIBNKAG_610.01.00.0
HNIBNKAG_621.00.01.0
HNIBNKAG_631.00.01.0
HNIBNKAG_640.01.00.0
HNIBNKAG_650.01.00.0
HNIBNKAG_661.00.01.0
HNIBNKAG_680.01.00.0
HNIBNKAG_790.01.00.0
HNIBNKAG_901.00.01.0
HNIBNKAG_1010.01.00.0
HNIBNKAG_1100.01.00.0
HNIBNKAG_1110.01.00.0
HNIBNKAG_1200.01.00.0
HNIBNKAG_1301.00.01.0
HNIBNKAG_1400.01.00.0
HNIBNKAG_1490.01.00.0
HNIBNKAG_1590.01.00.0
HNIBNKAG_1690.01.00.0
HNIBNKAG_1790.01.00.0
HNIBNKAG_1801.00.01.0
HNIBNKAG_1811.00.01.0
HNIBNKAG_1831.00.01.0
HNIBNKAG_1841.00.01.0
HNIBNKAG_1870.01.00.0
HNIBNKAG_1890.01.00.0
HNIBNKAG_1930.01.00.0
HNIBNKAG_1990.01.00.0
HNIBNKAG_2061.00.01.0
HNIBNKAG_2070.01.00.0
HNIBNKAG_2080.01.00.0
HNIBNKAG_2101.00.01.0
HNIBNKAG_2121.00.01.0
HNIBNKAG_2150.01.00.0
HNIBNKAG_2161.00.01.0
HNIBNKAG_2170.01.00.0
HNIBNKAG_2180.01.00.0
HNIBNKAG_2230.01.00.0
HNIBNKAG_2250.01.00.0
HNIBNKAG_2261.00.01.0
HNIBNKAG_2280.01.00.0
HNIBNKAG_2321.00.01.0
HNIBNKAG_2361.00.01.0
HNIBNKAG_2390.01.00.0
HNIBNKAG_2400.01.00.0
HNIBNKAG_2411.00.01.0
HNIBNKAG_2441.00.01.0
HNIBNKAG_2461.00.01.0
HNIBNKAG_2470.01.00.0
HNIBNKAG_2480.01.00.0
HNIBNKAG_2491.00.01.0
HNIBNKAG_2500.01.00.0
HNIBNKAG_2511.00.01.0
HNIBNKAG_2541.00.01.0
HNIBNKAG_2561.00.01.0
HNIBNKAG_2570.01.00.0
HNIBNKAG_2590.01.00.0
HNIBNKAG_2601.00.01.0
HNIBNKAG_2610.01.00.0
HNIBNKAG_2630.01.00.0
HNIBNKAG_2670.01.00.0
HNIBNKAG_2681.00.01.0
HNIBNKAG_2691.00.01.0
HNIBNKAG_2701.00.01.0
HNIBNKAG_2731.00.01.0
HNIBNKAG_2741.00.01.0
HNIBNKAG_2761.00.01.0
HNIBNKAG_2771.00.01.0
HNIBNKAG_2800.01.00.0
HNIBNKAG_2890.01.00.0
HNIBNKAG_2910.01.00.0
HNIBNKAG_2941.00.01.0
HNIBNKAG_2980.01.00.0
HNIBNKAG_2991.00.01.0
HNIBNKAG_3000.01.00.0
HNIBNKAG_3010.01.00.0
HNIBNKAG_3021.00.01.0
HNIBNKAG_3030.01.00.0
HNIBNKAG_3040.01.00.0
HNIBNKAG_3050.01.00.0
HNIBNKAG_3060.01.00.0
HNIBNKAG_3070.01.00.0
HNIBNKAG_3081.00.01.0
HNIBNKAG_3090.01.00.0
HNIBNKAG_3100.01.00.0
HNIBNKAG_3110.01.00.0
HNIBNKAG_3120.01.00.0
HNIBNKAG_3130.01.00.0
HNIBNKAG_3140.01.00.0
HNIBNKAG_3150.01.00.0
HNIBNKAG_3160.01.00.0
HNIBNKAG_3170.01.00.0
HNIBNKAG_3180.01.00.0
HNIBNKAG_3190.01.00.0
HNIBNKAG_3200.01.00.0
HNIBNKAG_3210.01.00.0
HNIBNKAG_3221.00.01.0
HNIBNKAG_3230.01.00.0
HNIBNKAG_3250.01.00.0
HNIBNKAG_3260.01.00.0
HNIBNKAG_3270.01.00.0
HNIBNKAG_3280.01.00.0
HNIBNKAG_3290.01.00.0
HNIBNKAG_3300.01.00.0
HNIBNKAG_3310.01.00.0
HNIBNKAG_3320.01.00.0
HNIBNKAG_3330.01.00.0
HNIBNKAG_3340.01.00.0
HNIBNKAG_3351.00.01.0
HNIBNKAG_3370.01.00.0
HNIBNKAG_3380.01.00.0
HNIBNKAG_3390.01.00.0
HNIBNKAG_3400.01.00.0
HNIBNKAG_3420.01.00.0
HNIBNKAG_3430.01.00.0
HNIBNKAG_3440.01.00.0
HNIBNKAG_3450.01.00.0
HNIBNKAG_3461.00.01.0
HNIBNKAG_3470.01.00.0
HNIBNKAG_3480.01.00.0
HNIBNKAG_3490.01.00.0
HNIBNKAG_3500.01.00.0
HNIBNKAG_3510.01.00.0
HNIBNKAG_3520.01.00.0
HNIBNKAG_3530.01.00.0
HNIBNKAG_3540.01.00.0
HNIBNKAG_3560.01.00.0
HNIBNKAG_3570.01.00.0
HNIBNKAG_3580.01.00.0
HNIBNKAG_3590.01.00.0
HNIBNKAG_3600.01.00.0
HNIBNKAG_3610.01.00.0
HNIBNKAG_3620.01.00.0
HNIBNKAG_3630.01.00.0
HNIBNKAG_3640.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
HNIBNKAG_5815940453FalseMyoviridaeVOG9945, VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG0198
HNIBNKAG_7653418890FalseMyoviridae / SiphoviridaeVOG9708, VOG2228, VOG4552, VOG8520, VOG8520, VOG4602, VOG0371, VOG0275, VOG4010, VOG2352, VOG2090, VOG4705
HNIBNKAG_344154922024FalseSiphoviridaeVOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG4633, VOG4659, VOG7017, VOG0083, VOG4687, VOG6540, VOG9945, VOG4705, VOG0861

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements