Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LCOEJCHF_1 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_2 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_3 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_4 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_5 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_6 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_7 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_8 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_9 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_10 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_11 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_12 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_13 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_14 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_15 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_16 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_17 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_18 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_19 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_20 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_21 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_22 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_23 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_24 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_25 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_26 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_27 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_28 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_29 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_30 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_31 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_32 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_33 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_34 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_35 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_36 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_37 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_38 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_39 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_40 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_41 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_42 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_43 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_44 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_45 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_46 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_47 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_48 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_49 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_50 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_51 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_52 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_53 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_54 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_55 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_56 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_57 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_58 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_59 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_61 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_62 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_63 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_64 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_65 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_66 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_68 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_79 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_87 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_96 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_103 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_104 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_111 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_118 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_127 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_129 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_130 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_134 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_137 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_141 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_144 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_147 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_148 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_153 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_154 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_155 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_158 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_159 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_160 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_164 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_167 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_168 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_171 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_172 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_176 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_178 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_181 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_182 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_183 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_184 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_186 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_187 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_188 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_192 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_193 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_196 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_197 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_199 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_200 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_204 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_206 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_208 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_209 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_211 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_214 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_215 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_218 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_219 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_220 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_222 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_230 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_234 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_237 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_241 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_244 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_245 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_246 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_247 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_248 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_249 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_250 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_252 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_253 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_254 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_255 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_256 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_257 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_258 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_259 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_260 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_261 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_262 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_263 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_264 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_265 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_266 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_267 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_268 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_269 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_270 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_271 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_272 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_273 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_274 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_275 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_276 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_277 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_278 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_279 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_280 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_281 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_282 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_283 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_284 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_285 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_286 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_287 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_288 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_289 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_290 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_291 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_292 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_293 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_294 | 1.0 | 0.0 | 1.0 |
| LCOEJCHF_295 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_296 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_297 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_298 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_299 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_300 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_301 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_302 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_303 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_304 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_305 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_306 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_307 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_308 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_309 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_310 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_311 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_312 | 0.0 | 1.0 | 0.0 |
| LCOEJCHF_313 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LCOEJCHF_4 | 7905 | 40138 | False | Siphoviridae | VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG0376, VOG2545, VOG4581, VOG4841, VOG0198, VOG6005, VOG3519, VOG0327, VOG3307, VOG5278, VOG3307, VOG3307, VOG3307, VOG4606, VOG6545, VOG4548, VOG0322, VOG4611, VOG9708, VOG2228, VOG4552, VOG8520, VOG8520, VOG4602, VOG0371, VOG0275, VOG4010, VOG2352, VOG2090, VOG4705 |
| LCOEJCHF_313 | 9346 | 40795 | False | Myoviridae | VOG5334, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG1956, VOG6163, VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG1915, VOG4918, VOG5027, VOG1912, VOG7407, VOG0796, VOG2545, VOG0376, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)