Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KIBCKNEI_163 | 58703 | 59407 | WalR | 4.74e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| KIBCKNEI_169 | 406 | 209 | CspR | 4.44e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KIBCKNEI_1 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_2 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_3 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_4 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_5 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_6 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_7 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_8 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_9 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_10 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_11 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_12 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_13 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_14 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_15 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_16 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_17 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_18 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_19 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_20 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_21 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_23 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_24 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_26 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_27 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_28 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_30 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_31 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_32 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_33 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_34 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_35 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_36 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_37 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_38 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_39 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_40 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_41 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_42 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_43 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_44 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_45 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_47 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_48 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_49 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_50 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_52 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_53 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_57 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_58 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_59 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_60 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_62 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_63 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_64 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_68 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_69 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_70 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_71 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_73 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_74 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_75 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_78 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_79 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_80 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_81 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_83 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_84 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_85 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_86 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_87 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_88 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_90 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_92 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_93 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_95 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_96 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_97 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_99 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_100 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_101 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_102 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_103 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_104 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_105 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_106 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_107 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_108 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_109 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_110 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_111 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_112 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_113 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_115 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_118 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_119 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_120 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_121 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_122 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_123 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_124 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_125 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_126 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_127 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_128 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_129 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_130 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_131 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_132 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_133 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_134 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_135 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_136 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_137 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_138 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_139 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_140 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_141 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_142 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_143 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_144 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_145 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_146 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_147 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_148 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_150 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_151 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_152 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_153 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_154 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_155 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_156 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_157 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_158 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_159 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_161 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_163 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_164 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_165 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_166 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_167 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_168 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_169 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_172 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_173 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_174 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_175 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_177 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_178 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_179 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_180 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_181 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_182 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_183 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_184 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_186 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_187 | 1.0 | 0.0 | 1.0 |
| KIBCKNEI_188 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_189 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_190 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_191 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_193 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_194 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_196 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_197 | 0.0 | 1.0 | 0.0 |
| KIBCKNEI_198 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KIBCKNEI_2 | 14811 | 49808 | False | Siphoviridae | VOG6495, VOG4552, VOG4891, VOG0181, VOG10867, VOG3642, VOG0321, VOG0322, VOG4548, VOG6545, VOG4606, VOG9759, VOG0152, VOG3643, VOG0044, VOG6681, VOG1563, VOG0198, VOG4570, VOG4549, VOG9303, VOG4841, VOG4581, VOG1886, VOG7540, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG6455 |
| KIBCKNEI_42 | 19422 | 39739 | False | Siphoviridae | VOG4649, VOG0054, VOG1637, VOG0648, VOG3498, VOG4763, VOG4633, VOG4545, VOG1898, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG0519, VOG4841, VOG5699 |
| KIBCKNEI_101 | 3533 | 24598 | False | Siphoviridae | VOG3699, VOG4544, VOG0720, VOG4564, VOG5616, VOG1300, VOG1183, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG3636, VOG4605, VOG4599, VOG6455 |
| KIBCKNEI_113 | 3460 | 12767 | False | Siphoviridae | VOG9741, VOG0536, VOG9860, VOG11003, VOG8987, VOG1638, VOG6238, VOG4566, VOG0186, VOG1309, VOG2338, VOG6495, VOG9667, VOG4602, VOG9312 |
Phigaro v2.4.0 (Database: Jan. 2024 release)