Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MMJAHCHK_1 | 12253 | 12059 | CspA | 4.03e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MMJAHCHK_1 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_2 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_3 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_4 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_5 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_6 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_7 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_8 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_9 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_10 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_11 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_12 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_13 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_14 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_15 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_16 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_17 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_18 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_19 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_20 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_21 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_22 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_23 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_24 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_25 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_26 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_27 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_28 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_29 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_30 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_31 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_32 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_33 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_34 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_35 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_36 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_37 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_38 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_39 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_40 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_41 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_42 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_43 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_44 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_45 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_46 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_47 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_48 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_49 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_50 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_51 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_52 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_53 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_54 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_55 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_56 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_58 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_59 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_60 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_61 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_62 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_63 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_64 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_65 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_66 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_67 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_69 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_70 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_72 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_73 | 1.0 | 0.0 | 1.0 |
| MMJAHCHK_74 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_77 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_88 | 0.0 | 1.0 | 0.0 |
| MMJAHCHK_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MMJAHCHK_22 | 63964 | 69597 | False | Siphoviridae / Podoviridae | VOG3557, VOG2350, VOG0774, VOG6140, VOG0862, VOG8520, VOG9667 |
| MMJAHCHK_22 | 78186 | 102033 | False | Siphoviridae | VOG4972, VOG1345, VOG4841, VOG4581, VOG1886, VOG0202, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG9813, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997 |
| MMJAHCHK_55 | 16688 | 45734 | False | Myoviridae | VOG4693, VOG0198, VOG4972, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG4711, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG10263, VOG6298, VOG3298, VOG8917, VOG9888, VOG0703, VOG8294 |
Phigaro v2.4.0 (Database: Jan. 2024 release)