Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JDICELJB_44 | 13354 | 14058 | WalR | 9.59e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JDICELJB_55 | 6275 | 6078 | CspR | 1.81e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JDICELJB_24 | 19091 | 20152 | repUS74 | 1063 / 1062 | 91.06 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JDICELJB_1 | 0.0 | 1.0 | 0.0 |
| JDICELJB_2 | 0.0 | 1.0 | 0.0 |
| JDICELJB_3 | 0.0 | 1.0 | 0.0 |
| JDICELJB_4 | 0.0 | 1.0 | 0.0 |
| JDICELJB_5 | 0.0 | 1.0 | 0.0 |
| JDICELJB_6 | 0.0 | 1.0 | 0.0 |
| JDICELJB_7 | 0.0 | 1.0 | 0.0 |
| JDICELJB_8 | 0.0 | 1.0 | 0.0 |
| JDICELJB_9 | 0.0 | 1.0 | 0.0 |
| JDICELJB_10 | 0.0 | 1.0 | 0.0 |
| JDICELJB_11 | 0.0 | 1.0 | 0.0 |
| JDICELJB_12 | 0.0 | 1.0 | 0.0 |
| JDICELJB_13 | 0.0 | 1.0 | 0.0 |
| JDICELJB_14 | 0.0 | 1.0 | 0.0 |
| JDICELJB_15 | 0.0 | 1.0 | 0.0 |
| JDICELJB_16 | 0.0 | 1.0 | 0.0 |
| JDICELJB_17 | 0.0 | 1.0 | 0.0 |
| JDICELJB_18 | 0.0 | 1.0 | 0.0 |
| JDICELJB_19 | 0.0 | 1.0 | 0.0 |
| JDICELJB_20 | 1.0 | 0.0 | 1.0 |
| JDICELJB_21 | 0.0 | 1.0 | 0.0 |
| JDICELJB_22 | 0.0 | 1.0 | 0.0 |
| JDICELJB_23 | 0.0 | 1.0 | 0.0 |
| JDICELJB_24 | 1.0 | 0.0 | 1.0 |
| JDICELJB_25 | 0.0 | 1.0 | 0.0 |
| JDICELJB_26 | 0.0 | 1.0 | 0.0 |
| JDICELJB_27 | 0.0 | 1.0 | 0.0 |
| JDICELJB_28 | 0.0 | 1.0 | 0.0 |
| JDICELJB_29 | 0.0 | 1.0 | 0.0 |
| JDICELJB_30 | 0.0 | 1.0 | 0.0 |
| JDICELJB_31 | 0.0 | 1.0 | 0.0 |
| JDICELJB_32 | 1.0 | 0.0 | 1.0 |
| JDICELJB_33 | 0.0 | 1.0 | 0.0 |
| JDICELJB_34 | 0.0 | 1.0 | 0.0 |
| JDICELJB_35 | 0.0 | 1.0 | 0.0 |
| JDICELJB_36 | 0.0 | 1.0 | 0.0 |
| JDICELJB_37 | 0.0 | 1.0 | 0.0 |
| JDICELJB_38 | 0.0 | 1.0 | 0.0 |
| JDICELJB_39 | 0.0 | 1.0 | 0.0 |
| JDICELJB_40 | 0.0 | 1.0 | 0.0 |
| JDICELJB_41 | 0.0 | 1.0 | 0.0 |
| JDICELJB_42 | 0.0 | 1.0 | 0.0 |
| JDICELJB_43 | 1.0 | 0.0 | 1.0 |
| JDICELJB_44 | 0.0 | 1.0 | 0.0 |
| JDICELJB_45 | 0.0 | 1.0 | 0.0 |
| JDICELJB_46 | 0.0 | 1.0 | 0.0 |
| JDICELJB_47 | 1.0 | 0.0 | 1.0 |
| JDICELJB_48 | 0.0 | 1.0 | 0.0 |
| JDICELJB_49 | 1.0 | 0.0 | 1.0 |
| JDICELJB_50 | 1.0 | 0.0 | 1.0 |
| JDICELJB_51 | 1.0 | 0.0 | 1.0 |
| JDICELJB_52 | 1.0 | 0.0 | 1.0 |
| JDICELJB_53 | 1.0 | 0.0 | 1.0 |
| JDICELJB_54 | 0.0 | 1.0 | 0.0 |
| JDICELJB_55 | 0.0 | 1.0 | 0.0 |
| JDICELJB_56 | 1.0 | 0.0 | 1.0 |
| JDICELJB_57 | 1.0 | 0.0 | 1.0 |
| JDICELJB_58 | 0.0 | 1.0 | 0.0 |
| JDICELJB_59 | 0.0 | 1.0 | 0.0 |
| JDICELJB_60 | 0.0 | 1.0 | 0.0 |
| JDICELJB_62 | 1.0 | 0.0 | 1.0 |
| JDICELJB_63 | 1.0 | 0.0 | 1.0 |
| JDICELJB_64 | 1.0 | 0.0 | 1.0 |
| JDICELJB_66 | 0.0 | 1.0 | 0.0 |
| JDICELJB_67 | 1.0 | 0.0 | 1.0 |
| JDICELJB_68 | 1.0 | 0.0 | 1.0 |
| JDICELJB_69 | 1.0 | 0.0 | 1.0 |
| JDICELJB_70 | 1.0 | 0.0 | 1.0 |
| JDICELJB_71 | 1.0 | 0.0 | 1.0 |
| JDICELJB_72 | 1.0 | 0.0 | 1.0 |
| JDICELJB_73 | 1.0 | 0.0 | 1.0 |
| JDICELJB_74 | 1.0 | 0.0 | 1.0 |
| JDICELJB_75 | 1.0 | 0.0 | 1.0 |
| JDICELJB_76 | 1.0 | 0.0 | 1.0 |
| JDICELJB_77 | 0.0 | 1.0 | 0.0 |
| JDICELJB_78 | 1.0 | 0.0 | 1.0 |
| JDICELJB_79 | 0.0 | 1.0 | 0.0 |
| JDICELJB_88 | 0.0 | 1.0 | 0.0 |
| JDICELJB_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JDICELJB_3 | 18407 | 48483 | False | Siphoviridae | VOG3304, VOG0862, VOG5353, VOG4552, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG7363, VOG5998, VOG5562, VOG4693, VOG0744, VOG4673, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
| JDICELJB_5 | 71605 | 78071 | False | Unknown | VOG1309, VOG0186, VOG4566, VOG0226, VOG10904, VOG11003, VOG9860, VOG0536, VOG9741 |
| JDICELJB_55 | 85324 | 94920 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)