Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ILPAHACC_21 | 28305 | 30230 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ILPAHACC_21 | 28305 | 30230 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ILPAHACC_21 | 28305 | 30227 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ILPAHACC_1 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_2 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_3 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_4 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_5 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_6 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_7 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_8 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_9 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_10 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_11 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_12 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_13 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_14 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_15 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_16 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_17 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_18 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_19 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_20 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_21 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_22 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_23 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_24 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_25 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_26 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_27 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_28 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_29 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_30 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_31 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_32 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_33 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_34 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_35 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_36 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_37 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_38 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_39 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_40 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_41 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_42 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_43 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_44 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_45 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_47 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_48 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_49 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_50 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_51 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_52 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_53 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_54 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_56 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_57 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_58 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_59 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_60 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_61 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_62 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_63 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_64 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_65 | 1.0 | 0.0 | 1.0 |
| ILPAHACC_66 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_67 | 0.0 | 1.0 | 0.0 |
| ILPAHACC_68 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)