Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNOLDAAK_66 | 62715 | 64640 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| NNOLDAAK_42 | 6296 | 7096 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| NNOLDAAK_42 | 4917 | 6083 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NNOLDAAK_42 | 6296 | 7096 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| NNOLDAAK_42 | 4917 | 6083 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| NNOLDAAK_66 | 62715 | 64640 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 90.45 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NNOLDAAK_42 | 6299 | 7096 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| NNOLDAAK_42 | 4917 | 6080 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| NNOLDAAK_66 | 62718 | 64640 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NNOLDAAK_64 | 408 | 1087 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NNOLDAAK_1 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_2 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_3 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_4 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_5 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_6 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_7 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_8 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_9 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_10 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_11 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_12 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_13 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_14 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_15 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_16 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_17 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_18 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_19 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_20 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_21 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_22 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_23 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_24 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_25 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_26 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_27 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_28 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_29 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_30 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_31 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_32 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_33 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_34 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_35 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_36 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_37 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_38 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_39 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_40 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_41 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_42 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_43 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_44 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_45 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_46 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_47 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_48 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_49 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_50 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_51 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_52 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_53 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_54 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_55 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_56 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_58 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_59 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_60 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_61 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_62 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_63 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_64 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_65 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_66 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_67 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_68 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_69 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_70 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_71 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_72 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_73 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_74 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_75 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_76 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_77 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_78 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_79 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_80 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_81 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_82 | 1.0 | 0.0 | 1.0 |
| NNOLDAAK_83 | 0.0 | 1.0 | 0.0 |
| NNOLDAAK_84 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NNOLDAAK_34 | 33586 | 41130 | False | Siphoviridae | VOG6488, |
Phigaro v2.4.0 (Database: Jan. 2024 release)