Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DCCFPPJI_103 | 33915 | 35889 | tet(Q) | ARO:3000191 | tet(Q) | 100.00 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DCCFPPJI_103 | 33915 | 35840 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 100.00 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DCCFPPJI_103 | 33918 | 35840 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DCCFPPJI_1 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_3 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_4 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_5 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_6 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_7 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_8 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_9 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_10 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_11 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_12 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_13 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_14 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_15 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_16 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_17 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_18 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_19 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_20 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_21 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_22 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_23 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_24 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_25 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_26 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_27 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_28 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_29 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_30 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_31 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_32 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_33 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_34 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_35 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_36 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_37 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_38 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_39 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_40 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_41 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_42 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_43 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_44 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_45 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_46 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_47 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_48 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_49 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_50 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_51 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_52 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_53 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_54 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_55 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_56 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_57 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_58 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_59 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_60 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_61 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_62 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_63 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_64 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_65 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_66 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_67 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_68 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_69 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_70 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_71 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_72 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_73 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_74 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_75 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_76 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_77 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_78 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_79 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_80 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_81 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_82 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_83 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_84 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_85 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_86 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_87 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_88 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_89 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_91 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_92 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_93 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_94 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_95 | 1.0 | 0.0 | 1.0 |
| DCCFPPJI_96 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_97 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_98 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_99 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_101 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_102 | 0.0 | 1.0 | 0.0 |
| DCCFPPJI_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DCCFPPJI_6 | 86925 | 92186 | False | Unknown | VOG4755, |
| DCCFPPJI_37 | 13216 | 20760 | False | Siphoviridae | VOG7238, |
| DCCFPPJI_54 | 190637 | 197023 | False | Unknown | VOG8840, |
Phigaro v2.4.0 (Database: Jan. 2024 release)