Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LEBDGJBC_2 | 29379 | 29576 | CspR | 8.78e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| LEBDGJBC_2 | 29379 | 29576 | CspA | 1.64e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LEBDGJBC_1 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_2 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_3 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_4 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_5 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_6 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_7 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_8 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_9 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_10 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_11 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_12 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_13 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_14 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_15 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_16 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_17 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_18 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_19 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_20 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_21 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_22 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_23 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_24 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_25 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_26 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_27 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_28 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_29 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_30 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_31 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_32 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_33 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_34 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_35 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_36 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_37 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_38 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_39 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_40 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_41 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_42 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_43 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_44 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_45 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_46 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_47 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_48 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_49 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_50 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_51 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_52 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_53 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_54 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_55 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_56 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_57 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_58 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_59 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_60 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_61 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_62 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_63 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_64 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_65 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_66 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_67 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_68 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_69 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_70 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_71 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_72 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_73 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_74 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_75 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_76 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_77 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_78 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_79 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_80 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_81 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_83 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_84 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_85 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_86 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_87 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_88 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_89 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_90 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_91 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_92 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_93 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_94 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_95 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_96 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_97 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_98 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_99 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_100 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_101 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_102 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_103 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_105 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_106 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_107 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_108 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_109 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_110 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_111 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_112 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_113 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_114 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_115 | 1.0 | 0.0 | 1.0 |
| LEBDGJBC_116 | 0.0 | 1.0 | 0.0 |
| LEBDGJBC_117 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LEBDGJBC_15 | 13530 | 28037 | False | Unknown | VOG11003, VOG0052, VOG7438, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581, VOG4571 |
Phigaro v2.4.0 (Database: Jan. 2024 release)