Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LPDOABPL_12 | 46391 | 47542 | rep32 | 1161 / 1161 | 98.62 | AL592102 |
| LPDOABPL_12 | 22484 | 23518 | rep38 | 1044 / 1104 | 81.42 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LPDOABPL_1 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_2 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_3 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_4 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_5 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_6 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_7 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_8 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_9 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_10 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_11 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_12 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_13 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_14 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_15 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_16 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_17 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_18 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_19 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_20 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_21 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_22 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_23 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_24 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_25 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_26 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_27 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_28 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_29 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_30 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_31 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_32 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_33 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_34 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_35 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_36 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_37 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_38 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_39 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_40 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_41 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_42 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_43 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_44 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_45 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_46 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_47 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_48 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_49 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_50 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_51 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_52 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_53 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_54 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_55 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_56 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_57 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_58 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_59 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_60 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_61 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_62 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_63 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_64 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_65 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_67 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_68 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_69 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_70 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_71 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_72 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_73 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_74 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_75 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_77 | 1.0 | 0.0 | 1.0 |
| LPDOABPL_78 | 0.0 | 1.0 | 0.0 |
| LPDOABPL_79 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LPDOABPL_20 | 2141 | 24937 | False | Siphoviridae | VOG4705, VOG9945, VOG5924, VOG0648, VOG4599, VOG0727, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG1315, VOG0198, VOG6005, VOG8222, VOG0327, VOG4994, VOG7908 |
Phigaro v2.4.0 (Database: Jan. 2024 release)