Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 2 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| KDBFDCJD_56 | 7985 | 9400 | STER_RS05250 | 0.0 | Capsule | Immune modulation | 95.20 | 100.00 | WP_011681165 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KDBFDCJD_68 | 49122 | 48418 | WalR | 1.00e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| KDBFDCJD_2 | 3450 | 3644 | CspR | 3.36e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| KDBFDCJD_2 | 3450 | 3647 | CspA | 5.15e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KDBFDCJD_73 | 2703 | 3632 | rep28 | 930 / 930 | 98.17 | CP003162 |
| KDBFDCJD_101 | 1538 | 2494 | repUS64 | 959 / 954 | 92.08 | JN601038 |
| KDBFDCJD_80 | 2102 | 3136 | rep38 | 1048 / 1104 | 82.44 | CP002655 |
| KDBFDCJD_93 | 2956 | 3918 | repUS73 | 979 / 1101 | 80.18 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KDBFDCJD_1 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_2 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_3 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_4 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_5 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_6 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_7 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_8 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_9 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_10 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_11 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_12 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_13 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_14 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_15 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_16 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_17 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_18 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_19 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_20 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_21 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_22 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_23 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_24 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_25 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_26 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_27 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_28 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_29 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_30 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_31 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_32 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_33 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_34 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_35 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_36 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_37 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_38 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_39 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_40 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_41 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_42 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_43 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_44 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_45 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_46 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_47 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_48 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_49 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_50 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_51 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_52 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_53 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_54 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_55 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_56 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_57 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_58 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_59 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_60 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_61 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_62 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_63 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_64 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_65 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_66 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_67 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_68 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_69 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_70 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_71 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_72 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_73 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_74 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_75 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_76 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_77 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_78 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_79 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_80 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_81 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_82 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_83 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_84 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_85 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_86 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_89 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_90 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_91 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_92 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_93 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_94 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_95 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_96 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_97 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_98 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_99 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_100 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_101 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_102 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_103 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_104 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_105 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_106 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_107 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_108 | 0.0 | 1.0 | 0.0 |
| KDBFDCJD_109 | 1.0 | 0.0 | 1.0 |
| KDBFDCJD_110 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KDBFDCJD_24 | 146042 | 169768 | False | Siphoviridae | VOG4615, VOG10957, VOG4705, VOG0804, VOG9640, VOG4856, VOG4619, VOG4828, VOG4633, VOG6163, VOG6118, VOG0725, VOG0799, VOG0724, VOG0539, VOG1320, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796 |
Phigaro v2.4.0 (Database: Jan. 2024 release)