Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CPBHKHNN_2 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_3 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_5 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_6 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_7 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_8 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_9 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_10 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_13 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_14 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_15 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_16 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_17 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_18 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_20 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_21 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_24 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_25 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_26 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_27 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_29 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_30 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_31 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_32 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_33 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_34 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_39 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_40 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_41 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_42 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_43 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_44 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_45 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_47 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_48 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_49 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_50 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_54 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_55 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_56 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_59 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_62 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_63 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_64 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_65 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_66 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_67 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_68 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_69 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_72 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_73 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_74 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_75 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_76 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_77 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_78 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_79 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_80 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_81 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_82 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_83 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_84 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_85 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_88 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_89 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_90 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_91 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_92 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_93 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_94 | 1.0 | 0.0 | 1.0 |
| CPBHKHNN_95 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_96 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_97 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_99 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_100 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_101 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_102 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_103 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_105 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_107 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_108 | 0.0 | 1.0 | 0.0 |
| CPBHKHNN_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CPBHKHNN_97 | 18454 | 40708 | False | Siphoviridae | VOG0612, VOG4544, VOG0691, VOG0692, VOG9827, VOG7941, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG8263, VOG0801, VOG4619, VOG5859, VOG9945, VOG4705, VOG0861, VOG0686 |
| CPBHKHNN_102 | 29013 | 51410 | False | Siphoviridae | VOG0052, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4571, VOG1259, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502 |
| CPBHKHNN_103 | 12833 | 38203 | False | Siphoviridae | VOG4705, VOG9945, VOG4659, VOG4633, VOG4760, VOG4586, VOG0207, VOG8997, VOG10939, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG0275 |
Phigaro v2.4.0 (Database: Jan. 2024 release)