Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNFNICLF_2 | 47776 | 49701 | tet(Q) | ARO:3000191 | tet(Q) | 99.84 | 97.56 | Z21523.1 |
| BNFNICLF_40 | 36686 | 37825 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| BNFNICLF_40 | 35351 | 36487 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| BNFNICLF_40 | 34312 | 35175 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BNFNICLF_2 | 47776 | 49701 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.95 | 100.00 | Z21523 |
| BNFNICLF_40 | 35351 | 36517 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BNFNICLF_40 | 34315 | 35175 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| BNFNICLF_40 | 35354 | 36517 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| BNFNICLF_2 | 47776 | 49698 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.84 | 100.00 | WP_002560998.1 |
| BNFNICLF_40 | 36689 | 37825 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BNFNICLF_1 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_2 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_3 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_4 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_5 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_6 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_7 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_8 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_9 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_10 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_11 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_12 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_13 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_14 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_15 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_16 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_17 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_18 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_19 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_20 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_21 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_22 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_23 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_24 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_25 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_26 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_27 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_28 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_29 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_30 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_31 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_32 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_33 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_34 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_35 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_36 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_37 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_38 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_39 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_40 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_41 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_42 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_43 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_44 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_45 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_46 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_47 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_48 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_49 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_50 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_51 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_52 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_53 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_54 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_55 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_56 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_57 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_58 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_59 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_60 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_61 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_62 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_63 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_64 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_65 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_66 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_67 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_68 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_69 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_70 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_71 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_72 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_73 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_74 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_75 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_76 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_77 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_78 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_79 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_80 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_81 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_82 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_83 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_84 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_85 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_86 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_87 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_88 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_89 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_90 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_91 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_92 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_93 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_94 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_95 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_96 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_97 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_98 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_99 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_100 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_101 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_102 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_103 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_104 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_105 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_106 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_107 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_108 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_109 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_110 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_111 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_112 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_113 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_114 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_115 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_116 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_117 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_118 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_120 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_121 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_122 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_123 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_124 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_125 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_126 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_127 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_128 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_129 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_130 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_131 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_132 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_134 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_135 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_136 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_137 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_138 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_139 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_140 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_141 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_142 | 1.0 | 0.0 | 1.0 |
| BNFNICLF_143 | 0.0 | 1.0 | 0.0 |
| BNFNICLF_144 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BNFNICLF_5 | 69214 | 76334 | False | Unknown | VOG4573, |
| BNFNICLF_20 | 81135 | 85797 | False | Unknown | VOG8840, |
| BNFNICLF_33 | 48426 | 56426 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)