Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KLDCOAMH_11 | 23715 | 24617 | CepA-29 | ARO:3006224 | CepA-29 | 99.67 | 100.00 | NG_050385.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KLDCOAMH_11 | 23715 | 24617 | cepA-29 | Unknown Beta-lactam | 99.78 | 100.00 | U05884 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KLDCOAMH_11 | 23718 | 24617 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_063865204.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KLDCOAMH_1 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_2 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_3 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_4 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_5 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_6 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_7 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_8 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_9 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_10 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_11 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_12 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_13 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_14 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_15 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_16 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_17 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_18 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_19 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_20 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_21 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_22 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_23 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_24 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_25 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_26 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_27 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_28 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_31 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_32 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_33 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_34 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_35 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_37 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_38 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_39 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_40 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_41 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_42 | 1.0 | 0.0 | 1.0 |
| KLDCOAMH_43 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_54 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_59 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_67 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_74 | 0.0 | 1.0 | 0.0 |
| KLDCOAMH_81 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)