Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PJJFNOGA_8 | 23924 | 23220 | WalR | 5.14e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| PJJFNOGA_9 | 15044 | 15241 | CspR | 9.91e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PJJFNOGA_1 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_2 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_3 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_4 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_5 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_6 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_7 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_8 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_9 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_10 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_11 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_12 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_13 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_14 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_15 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_16 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_17 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_18 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_19 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_20 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_21 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_22 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_23 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_24 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_25 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_26 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_27 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_28 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_29 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_30 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_31 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_32 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_33 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_34 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_35 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_36 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_37 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_38 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_39 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_40 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_41 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_42 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_43 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_44 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_45 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_46 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_47 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_48 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_49 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_50 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_51 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_52 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_53 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_54 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_55 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_56 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_57 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_58 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_59 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_60 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_61 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_62 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_63 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_64 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_65 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_66 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_67 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_68 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_69 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_70 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_71 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_72 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_73 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_74 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_75 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_76 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_77 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_78 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_79 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_80 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_81 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_82 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_83 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_84 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_86 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_87 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_88 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_89 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_90 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_91 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_92 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_93 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_94 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_95 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_96 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_97 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_99 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_100 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_101 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_102 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_103 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_104 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_105 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_106 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_107 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_108 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_109 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_110 | 0.0 | 1.0 | 0.0 |
| PJJFNOGA_111 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_112 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_113 | 1.0 | 0.0 | 1.0 |
| PJJFNOGA_114 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PJJFNOGA_3 | 143 | 23466 | False | Siphoviridae | VOG0531, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG10868, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017, VOG0703, VOG4918 |
| PJJFNOGA_13 | 47081 | 54316 | False | Siphoviridae | VOG9667, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG8987, VOG11003, VOG9860, VOG0536, VOG2820 |
| PJJFNOGA_35 | 1905 | 22848 | False | Siphoviridae | VOG0703, VOG7017, VOG0861, VOG4856, VOG4619, VOG0801, VOG1323, VOG0725, VOG0799, VOG1321, VOG9583, VOG1320, VOG4713, VOG1322, VOG0694, VOG4555, VOG1183, VOG1300, VOG5616, VOG4564, VOG0944, VOG5532, VOG0720, VOG10227 |
Phigaro v2.4.0 (Database: Jan. 2024 release)