Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BFOAGCKF_11 | 235998 | 235294 | WalR | 2.02e-114 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| BFOAGCKF_69 | 144894 | 144700 | CspR | 6.71e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| BFOAGCKF_69 | 144894 | 144697 | CspA | 1.03e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFOAGCKF_1 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_2 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_3 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_4 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_5 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_6 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_7 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_8 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_9 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_10 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_11 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_12 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_13 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_14 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_15 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_16 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_17 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_18 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_19 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_20 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_21 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_22 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_23 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_24 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_25 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_26 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_27 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_28 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_29 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_30 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_31 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_32 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_33 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_34 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_35 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_36 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_37 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_38 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_39 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_40 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_41 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_42 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_43 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_44 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_46 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_47 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_48 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_49 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_50 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_51 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_52 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_54 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_55 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_56 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_57 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_58 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_59 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_60 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_61 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_62 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_63 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_64 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_65 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_66 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_67 | 1.0 | 0.0 | 1.0 |
| BFOAGCKF_68 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_69 | 0.0 | 1.0 | 0.0 |
| BFOAGCKF_70 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BFOAGCKF_22 | 3732 | 25833 | False | Siphoviridae | VOG0198, VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG9888 |
| BFOAGCKF_66 | 23313 | 55876 | False | Siphoviridae | VOG0054, VOG1637, VOG8294, VOG3498, VOG10944, VOG10608, VOG1335, VOG4545, VOG1334, VOG1333, VOG4634, VOG0704, VOG1330, VOG4713, VOG1887, VOG3434, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG0045, VOG0198, VOG4693, VOG4566, VOG0186, VOG1309, VOG7298 |
| BFOAGCKF_66 | 56083 | 56800 | False | Unknown | VOG6495 |
| BFOAGCKF_66 | 57630 | 58417 | False | Unknown | VOG9667 |
Phigaro v2.4.0 (Database: Jan. 2024 release)