Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 1 | 7.07 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BCLHLCHL_77 | 214426 | 215631 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| BCLHLCHL_77 | 90694 | 91899 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
| BCLHLCHL_87 | 12504 | 13241 | ErmB | ARO:3000375 | ErmB | 97.96 | 98.79 | AF242872.1 |
| BCLHLCHL_106 | 3 | 1961 | tet(Q) | ARO:3000191 | tet(Q) | 96.63 | 99.39 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BCLHLCHL_87 | 12504 | 13241 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.73 | 100.00 | U18931 |
| BCLHLCHL_106 | 1 | 1913 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.37 | 99.33 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BCLHLCHL_87 | 7932 | 8705 | aad9 | ANT(9) family aminoglycoside nucleotidyltransferase | EXACTX | 100.00 | 100.00 | WP_002578722.1 |
| BCLHLCHL_77 | 215656 | 216165 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| BCLHLCHL_77 | 91924 | 92433 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| BCLHLCHL_77 | 214426 | 215628 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
| BCLHLCHL_77 | 90694 | 91896 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
| BCLHLCHL_106 | 3 | 1913 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.22 | 99.38 | WP_063856407.1 |
| BCLHLCHL_87 | 12504 | 13238 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | BLASTX | 99.18 | 100.00 | WP_002292226.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BCLHLCHL_84 | 22652 | 21072 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BCLHLCHL_130 | 2135 | 2715 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BCLHLCHL_1 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_2 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_3 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_4 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_5 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_6 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_7 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_8 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_9 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_10 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_11 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_12 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_13 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_15 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_16 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_17 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_18 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_19 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_20 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_21 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_22 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_23 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_24 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_25 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_26 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_27 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_28 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_29 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_30 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_31 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_32 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_33 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_34 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_35 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_36 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_37 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_38 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_39 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_40 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_41 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_42 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_43 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_44 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_45 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_46 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_47 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_48 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_49 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_50 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_51 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_52 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_53 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_54 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_55 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_56 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_57 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_58 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_59 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_60 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_61 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_62 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_63 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_64 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_65 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_66 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_67 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_68 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_69 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_70 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_71 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_72 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_73 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_74 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_75 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_76 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_77 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_78 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_79 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_80 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_81 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_82 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_83 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_84 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_85 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_86 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_87 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_88 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_89 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_90 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_91 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_92 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_93 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_94 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_95 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_96 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_97 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_98 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_99 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_100 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_101 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_102 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_103 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_104 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_105 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_106 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_107 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_108 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_109 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_111 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_112 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_113 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_114 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_115 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_116 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_117 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_118 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_119 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_120 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_121 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_122 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_123 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_124 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_125 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_126 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_127 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_128 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_129 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_130 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_131 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_132 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_133 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_134 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_135 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_136 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_137 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_138 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_139 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_140 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_141 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_142 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_143 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_144 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_145 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_146 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_147 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_148 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_149 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_150 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_151 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_152 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_153 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_154 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_155 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_156 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_157 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_158 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_159 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_160 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_161 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_162 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_163 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_164 | 1.0 | 0.0 | 1.0 |
| BCLHLCHL_165 | 0.0 | 1.0 | 0.0 |
| BCLHLCHL_166 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)