Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JBNPHMKL_30 | 918 | 2837 | tet(O) | ARO:3000190 | tet(O) | 99.22 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JBNPHMKL_30 | 918 | 2837 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.58 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JBNPHMKL_30 | 918 | 2834 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.69 | 100.00 | WP_012669445.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JBNPHMKL_1 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_2 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_3 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_4 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_5 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_6 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_7 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_8 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_9 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_10 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_11 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_12 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_13 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_14 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_15 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_16 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_17 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_18 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_19 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_20 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_21 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_22 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_23 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_24 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_25 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_26 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_27 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_28 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_29 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_30 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_31 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_32 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_33 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_34 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_35 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_36 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_37 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_38 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_39 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_40 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_41 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_42 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_43 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_44 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_46 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_47 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_48 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_49 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_50 | 0.0 | 1.0 | 0.0 |
| JBNPHMKL_51 | 1.0 | 0.0 | 1.0 |
| JBNPHMKL_52 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JBNPHMKL_50 | 44105 | 55123 | False | Myoviridae | VOG6495, |
| JBNPHMKL_51 | 7257 | 29307 | False | Siphoviridae | VOG1931, |
Phigaro v2.4.0 (Database: Jan. 2024 release)