Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GAGFMGDE_151 | 385 | 2304 | tet(O) | ARO:3000190 | tet(O) | 99.37 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GAGFMGDE_151 | 385 | 2304 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | M18896 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GAGFMGDE_151 | 388 | 2304 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.84 | 100.00 | WP_012669445.1 |
| GAGFMGDE_148 | 5378 | 5578 | vanU-G | glycopeptide resistance transcriptional regulator VanU-G | PARTIALX | 80.60 | 89.33 | WP_021418929.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GAGFMGDE_1 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_2 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_3 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_4 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_5 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_6 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_7 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_8 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_9 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_10 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_11 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_12 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_13 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_14 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_15 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_16 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_17 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_18 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_19 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_20 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_21 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_22 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_23 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_24 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_25 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_26 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_27 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_28 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_29 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_30 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_31 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_32 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_33 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_34 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_35 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_36 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_37 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_38 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_39 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_40 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_41 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_42 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_43 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_44 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_45 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_46 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_47 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_48 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_49 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_50 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_51 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_52 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_53 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_54 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_55 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_56 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_57 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_58 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_59 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_60 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_61 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_62 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_63 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_64 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_65 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_66 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_67 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_68 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_69 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_70 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_71 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_72 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_73 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_74 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_75 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_76 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_77 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_78 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_79 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_80 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_81 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_82 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_83 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_84 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_85 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_86 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_87 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_88 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_89 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_90 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_91 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_92 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_93 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_94 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_95 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_96 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_97 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_98 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_99 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_100 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_101 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_102 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_103 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_104 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_105 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_106 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_107 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_108 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_109 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_110 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_111 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_112 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_113 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_114 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_116 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_117 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_118 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_119 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_120 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_121 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_122 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_123 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_124 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_125 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_126 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_127 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_128 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_129 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_130 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_131 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_132 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_133 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_134 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_135 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_136 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_137 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_138 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_139 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_140 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_141 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_142 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_143 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_144 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_145 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_146 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_147 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_148 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_149 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_150 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_151 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_152 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_153 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_154 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_155 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_156 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_157 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_158 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_159 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_160 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_161 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_162 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_163 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_164 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_165 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_166 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_167 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_168 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_169 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_170 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_171 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_172 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_173 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_174 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_175 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_176 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_177 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_178 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_179 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_180 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_181 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_182 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_183 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_184 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_185 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_186 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_187 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_188 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_189 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_190 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_191 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_192 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_193 | 0.0 | 1.0 | 0.0 |
| GAGFMGDE_194 | 1.0 | 0.0 | 1.0 |
| GAGFMGDE_195 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GAGFMGDE_79 | 20262 | 31159 | False | Siphoviridae | VOG0796, |
Phigaro v2.4.0 (Database: Jan. 2024 release)