Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MAKJDLNK_161 | 21536 | 21733 | CspA | 4.69e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| MAKJDLNK_161 | 21536 | 21730 | CspR | 2.03e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MAKJDLNK_171 | 10558 | 11100 | rep38 | 543 / 903 | 85.82 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MAKJDLNK_1 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_2 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_3 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_4 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_5 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_6 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_13 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_24 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_35 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_46 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_57 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_68 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_79 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_90 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_101 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_112 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_113 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_124 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_135 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_146 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_147 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_148 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_149 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_150 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_151 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_152 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_153 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_154 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_155 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_156 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_157 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_158 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_159 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_160 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_161 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_162 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_163 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_164 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_165 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_166 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_167 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_168 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_169 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_170 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_171 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_172 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_173 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_174 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_175 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_176 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_177 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_178 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_179 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_180 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_181 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_182 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_183 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_184 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_185 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_186 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_187 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_188 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_189 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_190 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_191 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_192 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_193 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_194 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_195 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_196 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_197 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_198 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_199 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_200 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_201 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_202 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_203 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_204 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_205 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_206 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_207 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_208 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_209 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_210 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_212 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_213 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_214 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_215 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_216 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_217 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_218 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_219 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_220 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_221 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_222 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_223 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_224 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_225 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_226 | 0.0 | 1.0 | 0.0 |
| MAKJDLNK_228 | 1.0 | 0.0 | 1.0 |
| MAKJDLNK_229 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MAKJDLNK_2 | 4796 | 39428 | False | Siphoviridae | VOG3558, VOG0862, VOG9667, VOG3622, VOG4552, VOG2228, VOG3929, VOG1309, VOG0186, VOG0226, VOG4799, VOG0198, VOG3691, VOG4841, VOG4581, VOG1886, VOG10142, VOG4556, VOG4568, VOG0204, VOG0205, VOG4317, VOG0207, VOG4586, VOG0209, VOG0083, VOG0801, VOG3462, VOG10972, VOG0565, VOG9997, VOG11074, VOG4687, VOG1637, VOG0703 |
| MAKJDLNK_162 | 478 | 18313 | False | Siphoviridae | VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG4581, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047 |
Phigaro v2.4.0 (Database: Jan. 2024 release)