Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NBCJANAF_76 | 72667 | 73557 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| NBCJANAF_8 | 894 | 1694 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NBCJANAF_8 | 894 | 1694 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NBCJANAF_76 | 72667 | 73554 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| NBCJANAF_8 | 897 | 1694 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NBCJANAF_59 | 1 | 454 | repUS2 | 455 / 681 | 99.34 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NBCJANAF_1 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_2 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_3 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_4 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_5 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_6 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_7 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_8 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_9 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_10 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_11 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_12 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_13 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_14 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_15 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_16 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_17 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_18 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_19 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_20 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_21 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_22 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_23 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_24 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_25 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_26 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_27 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_28 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_29 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_30 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_31 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_32 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_33 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_34 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_35 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_36 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_37 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_38 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_39 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_40 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_41 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_42 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_43 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_44 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_45 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_46 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_47 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_48 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_49 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_50 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_51 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_52 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_53 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_54 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_55 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_56 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_57 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_58 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_59 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_60 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_61 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_62 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_63 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_64 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_65 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_66 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_67 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_68 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_69 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_70 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_71 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_72 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_73 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_74 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_75 | 1.0 | 0.0 | 1.0 |
| NBCJANAF_76 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_77 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_78 | 0.0 | 1.0 | 0.0 |
| NBCJANAF_79 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NBCJANAF_11 | 563439 | 574911 | False | Siphoviridae | VOG3992, |
| NBCJANAF_66 | 111721 | 120055 | False | Siphoviridae | VOG1146, |
Phigaro v2.4.0 (Database: Jan. 2024 release)