Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGEDHFJD_137 | 72692 | 73582 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| DGEDHFJD_59 | 957 | 1757 | ErmF | ARO:3000498 | ErmF | 98.50 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DGEDHFJD_59 | 957 | 1757 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGEDHFJD_137 | 72692 | 73579 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| DGEDHFJD_59 | 960 | 1757 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DGEDHFJD_23 | 1619 | 2298 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DGEDHFJD_1 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_2 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_3 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_4 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_5 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_6 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_7 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_8 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_9 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_10 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_11 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_12 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_13 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_14 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_15 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_16 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_17 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_18 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_19 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_20 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_21 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_22 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_23 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_24 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_25 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_26 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_27 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_28 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_29 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_30 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_31 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_32 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_33 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_34 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_35 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_36 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_37 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_38 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_39 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_40 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_41 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_42 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_43 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_44 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_45 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_46 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_47 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_48 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_49 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_50 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_51 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_52 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_54 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_55 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_56 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_57 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_58 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_59 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_60 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_61 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_62 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_63 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_64 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_65 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_66 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_67 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_68 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_69 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_70 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_71 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_72 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_73 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_74 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_75 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_76 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_77 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_78 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_79 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_80 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_81 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_82 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_83 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_84 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_85 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_86 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_87 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_88 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_89 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_90 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_91 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_92 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_93 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_94 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_95 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_96 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_97 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_98 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_99 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_100 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_102 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_103 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_104 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_105 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_106 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_107 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_108 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_109 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_110 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_111 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_112 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_113 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_114 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_115 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_116 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_117 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_118 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_119 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_120 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_121 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_122 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_123 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_124 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_125 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_126 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_127 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_128 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_129 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_130 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_131 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_132 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_133 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_134 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_135 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_136 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_137 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_138 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_139 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_140 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_141 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_142 | 0.0 | 1.0 | 0.0 |
| DGEDHFJD_143 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_144 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_145 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_146 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_147 | 1.0 | 0.0 | 1.0 |
| DGEDHFJD_148 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DGEDHFJD_60 | 563441 | 574913 | False | Siphoviridae | VOG3992, |
| DGEDHFJD_104 | 111721 | 120055 | False | Siphoviridae | VOG1146, |
Phigaro v2.4.0 (Database: Jan. 2024 release)