Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJOJOBKD_138 | 116310 | 117200 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| BJOJOBKD_127 | 24256 | 26181 | tet(Q) | ARO:3000191 | tet(Q) | 89.39 | 97.56 | Z21523.1 |
| BJOJOBKD_127 | 22377 | 23513 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| BJOJOBKD_127 | 21364 | 22164 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| BJOJOBKD_90 | 21264 | 23189 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BJOJOBKD_127 | 21364 | 22164 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| BJOJOBKD_127 | 22377 | 23543 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| BJOJOBKD_90 | 21264 | 23189 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BJOJOBKD_138 | 116313 | 117200 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| BJOJOBKD_127 | 21364 | 22161 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| BJOJOBKD_127 | 22380 | 23543 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| BJOJOBKD_90 | 21264 | 23186 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BJOJOBKD_127 | 24259 | 26181 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.86 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BJOJOBKD_12 | 1961 | 2640 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BJOJOBKD_1 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_2 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_3 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_4 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_5 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_6 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_7 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_8 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_9 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_10 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_11 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_12 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_13 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_14 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_15 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_16 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_17 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_18 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_19 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_20 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_21 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_22 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_23 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_24 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_25 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_26 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_27 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_28 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_29 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_30 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_31 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_32 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_33 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_34 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_35 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_36 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_37 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_38 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_39 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_40 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_41 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_42 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_43 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_44 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_45 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_46 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_47 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_48 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_49 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_50 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_51 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_52 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_53 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_54 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_55 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_56 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_57 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_58 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_59 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_60 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_61 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_62 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_63 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_64 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_65 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_66 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_67 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_68 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_69 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_70 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_71 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_72 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_73 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_74 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_75 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_76 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_77 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_78 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_79 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_80 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_81 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_82 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_83 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_84 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_85 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_86 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_87 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_88 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_89 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_90 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_91 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_92 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_93 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_94 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_95 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_96 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_97 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_98 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_99 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_100 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_101 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_102 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_103 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_104 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_105 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_106 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_107 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_108 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_109 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_110 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_111 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_112 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_113 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_114 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_115 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_116 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_117 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_118 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_119 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_120 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_121 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_122 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_123 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_124 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_125 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_126 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_127 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_128 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_129 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_130 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_131 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_132 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_133 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_134 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_135 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_136 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_137 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_138 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_139 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_140 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_141 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_142 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_143 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_144 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_145 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_146 | 0.0 | 1.0 | 0.0 |
| BJOJOBKD_147 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_148 | 1.0 | 0.0 | 1.0 |
| BJOJOBKD_149 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BJOJOBKD_90 | 2549 | 11746 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)