Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KALBEMCL_78 | 48026 | 48916 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| KALBEMCL_106 | 14278 | 16203 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| KALBEMCL_16 | 915 | 2081 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| KALBEMCL_35 | 51 | 1835 | tet(Q) | ARO:3000191 | tet(Q) | 89.30 | 90.41 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KALBEMCL_16 | 50 | 702 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| KALBEMCL_16 | 915 | 2081 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| KALBEMCL_106 | 14278 | 16203 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KALBEMCL_78 | 48026 | 48913 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| KALBEMCL_16 | 52 | 699 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| KALBEMCL_16 | 918 | 2081 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| KALBEMCL_106 | 14278 | 16200 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KALBEMCL_35 | 30 | 1811 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KALBEMCL_19 | 1514 | 2193 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KALBEMCL_1 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_2 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_3 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_4 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_5 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_6 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_7 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_8 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_9 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_10 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_11 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_12 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_13 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_14 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_15 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_16 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_17 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_18 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_19 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_20 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_21 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_22 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_23 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_24 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_25 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_26 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_27 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_28 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_29 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_30 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_31 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_32 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_33 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_34 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_35 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_36 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_37 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_38 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_39 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_40 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_41 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_42 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_43 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_44 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_45 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_46 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_47 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_48 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_49 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_50 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_51 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_52 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_53 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_54 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_55 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_56 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_57 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_58 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_59 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_60 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_61 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_62 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_63 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_64 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_65 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_66 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_67 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_68 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_69 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_70 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_71 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_72 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_73 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_74 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_75 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_76 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_77 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_78 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_79 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_80 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_81 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_82 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_83 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_84 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_85 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_86 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_87 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_88 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_89 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_90 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_91 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_92 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_93 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_94 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_95 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_96 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_97 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_98 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_99 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_100 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_101 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_102 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_103 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_104 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_105 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_106 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_107 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_108 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_109 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_110 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_111 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_112 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_113 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_114 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_115 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_116 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_117 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_118 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_119 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_120 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_121 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_122 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_123 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_124 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_125 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_126 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_127 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_128 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_129 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_130 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_131 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_132 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_133 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_134 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_135 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_136 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_137 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_138 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_139 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_140 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_141 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_142 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_143 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_144 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_145 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_146 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_147 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_148 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_149 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_150 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_151 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_152 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_153 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_154 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_155 | 1.0 | 0.0 | 1.0 |
| KALBEMCL_156 | 0.0 | 1.0 | 0.0 |
| KALBEMCL_157 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)