Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KGKLCCPP_98 | 127435 | 129195 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
| KGKLCCPP_68 | 56952 | 57842 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| KGKLCCPP_113 | 8233 | 10158 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| KGKLCCPP_14 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KGKLCCPP_14 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| KGKLCCPP_14 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| KGKLCCPP_113 | 8233 | 10158 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KGKLCCPP_68 | 56952 | 57839 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| KGKLCCPP_14 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| KGKLCCPP_14 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| KGKLCCPP_113 | 8233 | 10155 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KGKLCCPP_98 | 127435 | 129216 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KGKLCCPP_17 | 1355 | 2034 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KGKLCCPP_1 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_2 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_3 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_4 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_5 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_6 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_7 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_8 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_9 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_10 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_11 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_12 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_13 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_14 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_15 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_16 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_17 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_18 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_19 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_20 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_21 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_22 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_23 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_24 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_25 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_26 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_27 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_28 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_29 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_30 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_31 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_32 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_33 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_34 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_35 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_36 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_37 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_38 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_39 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_40 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_41 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_42 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_43 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_44 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_45 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_46 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_47 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_49 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_50 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_51 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_52 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_53 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_54 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_55 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_56 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_57 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_58 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_59 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_60 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_61 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_62 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_63 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_64 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_65 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_66 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_67 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_68 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_69 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_70 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_71 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_72 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_73 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_74 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_75 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_76 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_77 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_78 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_79 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_80 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_81 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_82 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_83 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_84 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_85 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_86 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_87 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_88 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_89 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_90 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_91 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_92 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_93 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_94 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_95 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_96 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_97 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_98 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_99 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_100 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_101 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_102 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_103 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_104 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_105 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_106 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_107 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_108 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_109 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_110 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_111 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_112 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_113 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_114 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_115 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_116 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_117 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_118 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_119 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_120 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_121 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_122 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_123 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_124 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_125 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_126 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_127 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_128 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_129 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_130 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_131 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_132 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_133 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_134 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_135 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_136 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_137 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_138 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_139 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_140 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_141 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_142 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_143 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_144 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_145 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_146 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_147 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_148 | 1.0 | 0.0 | 1.0 |
| KGKLCCPP_149 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_150 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_152 | 0.0 | 1.0 | 0.0 |
| KGKLCCPP_153 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)