Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IHPLDKEB_115 | 316263 | 318023 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
| IHPLDKEB_122 | 41560 | 42450 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| IHPLDKEB_132 | 25506 | 27431 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| IHPLDKEB_21 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IHPLDKEB_21 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| IHPLDKEB_21 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| IHPLDKEB_132 | 25506 | 27431 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IHPLDKEB_122 | 41560 | 42447 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| IHPLDKEB_21 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| IHPLDKEB_21 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| IHPLDKEB_132 | 25506 | 27428 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| IHPLDKEB_115 | 316263 | 318044 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IHPLDKEB_26 | 2013 | 2692 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IHPLDKEB_1 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_3 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_4 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_5 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_6 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_7 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_8 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_10 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_11 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_12 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_13 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_14 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_15 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_16 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_17 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_18 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_19 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_20 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_21 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_22 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_23 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_24 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_25 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_26 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_27 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_28 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_30 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_31 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_32 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_33 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_34 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_35 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_36 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_37 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_38 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_39 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_40 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_41 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_42 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_43 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_44 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_45 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_46 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_47 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_48 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_49 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_50 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_51 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_52 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_53 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_54 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_55 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_56 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_57 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_58 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_59 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_60 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_61 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_62 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_63 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_64 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_65 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_66 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_67 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_68 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_69 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_71 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_72 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_73 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_74 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_75 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_76 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_77 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_78 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_79 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_80 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_81 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_82 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_83 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_84 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_85 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_86 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_87 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_88 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_89 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_90 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_91 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_92 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_93 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_94 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_95 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_96 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_97 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_98 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_99 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_100 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_101 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_102 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_103 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_104 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_105 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_106 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_107 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_108 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_109 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_110 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_111 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_112 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_113 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_114 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_115 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_116 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_117 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_118 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_119 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_120 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_121 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_122 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_123 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_124 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_125 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_126 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_127 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_128 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_129 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_130 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_131 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_132 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_133 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_134 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_135 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_136 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_137 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_138 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_139 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_140 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_141 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_142 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_143 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_144 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_145 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_146 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_147 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_148 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_149 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_150 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_151 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_152 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_153 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_154 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_155 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_156 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_157 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_158 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_159 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_160 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_161 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_162 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_163 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_164 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_165 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_166 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_167 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_168 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_169 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_170 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_171 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_172 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_173 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_174 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_175 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_176 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_177 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_178 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_179 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_180 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_181 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_182 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_183 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_184 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_185 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_186 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_187 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_188 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_189 | 1.0 | 0.0 | 1.0 |
| IHPLDKEB_190 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_191 | 0.0 | 1.0 | 0.0 |
| IHPLDKEB_192 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IHPLDKEB_132 | 5586 | 15989 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)