Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JJLKFMAC_116 | 21263 | 23188 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| JJLKFMAC_103 | 9796 | 10686 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| JJLKFMAC_28 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| JJLKFMAC_85 | 51 | 1811 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JJLKFMAC_28 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| JJLKFMAC_28 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| JJLKFMAC_116 | 21263 | 23188 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JJLKFMAC_103 | 9799 | 10686 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| JJLKFMAC_28 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| JJLKFMAC_28 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| JJLKFMAC_116 | 21263 | 23185 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| JJLKFMAC_85 | 30 | 1811 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JJLKFMAC_35 | 95 | 774 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JJLKFMAC_1 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_2 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_3 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_4 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_5 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_6 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_7 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_8 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_9 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_10 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_11 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_12 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_13 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_14 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_15 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_16 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_17 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_18 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_19 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_20 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_21 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_22 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_23 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_24 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_25 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_26 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_27 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_28 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_29 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_30 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_31 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_32 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_33 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_34 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_35 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_36 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_37 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_38 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_39 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_40 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_41 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_42 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_43 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_44 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_45 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_46 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_47 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_48 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_49 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_50 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_51 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_52 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_54 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_55 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_56 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_57 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_58 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_59 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_60 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_61 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_62 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_63 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_64 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_65 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_66 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_67 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_68 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_69 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_70 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_71 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_73 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_74 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_75 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_76 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_77 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_78 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_80 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_81 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_82 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_83 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_84 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_85 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_86 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_87 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_88 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_89 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_90 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_91 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_92 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_93 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_94 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_95 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_96 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_97 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_98 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_99 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_100 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_101 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_102 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_103 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_104 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_105 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_106 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_107 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_108 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_109 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_110 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_111 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_112 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_113 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_114 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_115 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_116 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_117 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_118 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_119 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_120 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_121 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_122 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_123 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_124 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_125 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_126 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_127 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_128 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_129 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_130 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_131 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_132 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_133 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_134 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_135 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_136 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_137 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_138 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_139 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_140 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_141 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_142 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_143 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_144 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_145 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_146 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_147 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_148 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_149 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_150 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_151 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_152 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_153 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_154 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_155 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_156 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_157 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_158 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_159 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_160 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_161 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_162 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_163 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_164 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_165 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_166 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_167 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_168 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_169 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_170 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_171 | 1.0 | 0.0 | 1.0 |
| JJLKFMAC_172 | 0.0 | 1.0 | 0.0 |
| JJLKFMAC_173 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JJLKFMAC_116 | 2549 | 11745 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)