Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BOBEECEC_76 | 56952 | 57842 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| BOBEECEC_120 | 8233 | 10158 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| BOBEECEC_27 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| BOBEECEC_117 | 51 | 1811 | tet(Q) | ARO:3000191 | tet(Q) | 89.25 | 89.19 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BOBEECEC_27 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| BOBEECEC_27 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| BOBEECEC_120 | 8233 | 10158 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BOBEECEC_76 | 56952 | 57839 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| BOBEECEC_27 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| BOBEECEC_27 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| BOBEECEC_120 | 8233 | 10155 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BOBEECEC_117 | 30 | 1811 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.06 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BOBEECEC_146 | 5399 | 6078 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BOBEECEC_1 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_2 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_3 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_4 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_5 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_6 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_7 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_8 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_9 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_10 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_11 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_12 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_13 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_14 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_15 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_16 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_17 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_18 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_19 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_20 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_21 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_22 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_23 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_24 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_25 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_26 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_27 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_28 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_29 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_30 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_31 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_32 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_33 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_34 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_35 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_36 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_37 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_38 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_39 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_40 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_41 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_42 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_43 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_44 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_45 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_46 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_47 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_48 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_49 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_50 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_51 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_52 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_53 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_54 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_55 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_56 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_57 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_58 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_59 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_60 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_61 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_62 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_63 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_64 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_65 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_66 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_67 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_68 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_69 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_70 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_71 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_72 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_73 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_74 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_75 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_76 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_77 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_78 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_79 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_80 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_81 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_82 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_83 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_84 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_85 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_86 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_87 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_88 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_89 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_90 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_91 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_92 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_93 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_94 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_95 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_96 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_97 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_98 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_99 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_100 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_101 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_102 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_103 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_104 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_105 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_106 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_107 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_108 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_109 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_110 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_111 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_112 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_113 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_114 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_115 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_116 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_117 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_118 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_119 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_120 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_121 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_122 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_123 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_124 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_125 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_126 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_127 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_128 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_129 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_130 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_131 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_132 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_133 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_134 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_135 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_136 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_137 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_138 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_139 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_140 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_141 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_142 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_143 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_144 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_145 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_146 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_147 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_148 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_149 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_150 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_151 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_152 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_153 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_154 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_155 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_156 | 1.0 | 0.0 | 1.0 |
| BOBEECEC_157 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_158 | 0.0 | 1.0 | 0.0 |
| BOBEECEC_159 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)