Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LLANENKH_124 | 127435 | 129195 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
| LLANENKH_96 | 41561 | 42451 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| LLANENKH_115 | 21263 | 23188 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| LLANENKH_20 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LLANENKH_20 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| LLANENKH_20 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| LLANENKH_115 | 21263 | 23188 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LLANENKH_96 | 41561 | 42448 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| LLANENKH_20 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| LLANENKH_20 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| LLANENKH_115 | 21263 | 23185 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| LLANENKH_124 | 127435 | 129216 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| LLANENKH_25 | 2061 | 2740 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LLANENKH_1 | 0.0 | 1.0 | 0.0 |
| LLANENKH_2 | 0.0 | 1.0 | 0.0 |
| LLANENKH_3 | 1.0 | 0.0 | 1.0 |
| LLANENKH_4 | 0.0 | 1.0 | 0.0 |
| LLANENKH_6 | 0.0 | 1.0 | 0.0 |
| LLANENKH_7 | 0.0 | 1.0 | 0.0 |
| LLANENKH_8 | 1.0 | 0.0 | 1.0 |
| LLANENKH_9 | 0.0 | 1.0 | 0.0 |
| LLANENKH_10 | 1.0 | 0.0 | 1.0 |
| LLANENKH_11 | 0.0 | 1.0 | 0.0 |
| LLANENKH_12 | 1.0 | 0.0 | 1.0 |
| LLANENKH_13 | 0.0 | 1.0 | 0.0 |
| LLANENKH_14 | 0.0 | 1.0 | 0.0 |
| LLANENKH_15 | 1.0 | 0.0 | 1.0 |
| LLANENKH_16 | 1.0 | 0.0 | 1.0 |
| LLANENKH_17 | 1.0 | 0.0 | 1.0 |
| LLANENKH_18 | 0.0 | 1.0 | 0.0 |
| LLANENKH_19 | 1.0 | 0.0 | 1.0 |
| LLANENKH_20 | 1.0 | 0.0 | 1.0 |
| LLANENKH_21 | 0.0 | 1.0 | 0.0 |
| LLANENKH_22 | 0.0 | 1.0 | 0.0 |
| LLANENKH_23 | 0.0 | 1.0 | 0.0 |
| LLANENKH_24 | 0.0 | 1.0 | 0.0 |
| LLANENKH_25 | 1.0 | 0.0 | 1.0 |
| LLANENKH_26 | 1.0 | 0.0 | 1.0 |
| LLANENKH_27 | 1.0 | 0.0 | 1.0 |
| LLANENKH_28 | 1.0 | 0.0 | 1.0 |
| LLANENKH_29 | 0.0 | 1.0 | 0.0 |
| LLANENKH_30 | 1.0 | 0.0 | 1.0 |
| LLANENKH_31 | 0.0 | 1.0 | 0.0 |
| LLANENKH_32 | 0.0 | 1.0 | 0.0 |
| LLANENKH_33 | 0.0 | 1.0 | 0.0 |
| LLANENKH_35 | 1.0 | 0.0 | 1.0 |
| LLANENKH_36 | 1.0 | 0.0 | 1.0 |
| LLANENKH_37 | 0.0 | 1.0 | 0.0 |
| LLANENKH_38 | 0.0 | 1.0 | 0.0 |
| LLANENKH_39 | 0.0 | 1.0 | 0.0 |
| LLANENKH_40 | 1.0 | 0.0 | 1.0 |
| LLANENKH_41 | 0.0 | 1.0 | 0.0 |
| LLANENKH_42 | 0.0 | 1.0 | 0.0 |
| LLANENKH_43 | 0.0 | 1.0 | 0.0 |
| LLANENKH_44 | 0.0 | 1.0 | 0.0 |
| LLANENKH_45 | 0.0 | 1.0 | 0.0 |
| LLANENKH_46 | 0.0 | 1.0 | 0.0 |
| LLANENKH_47 | 0.0 | 1.0 | 0.0 |
| LLANENKH_48 | 1.0 | 0.0 | 1.0 |
| LLANENKH_49 | 1.0 | 0.0 | 1.0 |
| LLANENKH_50 | 1.0 | 0.0 | 1.0 |
| LLANENKH_51 | 0.0 | 1.0 | 0.0 |
| LLANENKH_52 | 1.0 | 0.0 | 1.0 |
| LLANENKH_53 | 0.0 | 1.0 | 0.0 |
| LLANENKH_54 | 1.0 | 0.0 | 1.0 |
| LLANENKH_55 | 0.0 | 1.0 | 0.0 |
| LLANENKH_56 | 1.0 | 0.0 | 1.0 |
| LLANENKH_57 | 1.0 | 0.0 | 1.0 |
| LLANENKH_58 | 1.0 | 0.0 | 1.0 |
| LLANENKH_59 | 0.0 | 1.0 | 0.0 |
| LLANENKH_60 | 1.0 | 0.0 | 1.0 |
| LLANENKH_61 | 0.0 | 1.0 | 0.0 |
| LLANENKH_62 | 0.0 | 1.0 | 0.0 |
| LLANENKH_63 | 1.0 | 0.0 | 1.0 |
| LLANENKH_64 | 1.0 | 0.0 | 1.0 |
| LLANENKH_66 | 0.0 | 1.0 | 0.0 |
| LLANENKH_67 | 0.0 | 1.0 | 0.0 |
| LLANENKH_68 | 0.0 | 1.0 | 0.0 |
| LLANENKH_69 | 1.0 | 0.0 | 1.0 |
| LLANENKH_70 | 1.0 | 0.0 | 1.0 |
| LLANENKH_71 | 0.0 | 1.0 | 0.0 |
| LLANENKH_72 | 0.0 | 1.0 | 0.0 |
| LLANENKH_73 | 0.0 | 1.0 | 0.0 |
| LLANENKH_74 | 1.0 | 0.0 | 1.0 |
| LLANENKH_75 | 0.0 | 1.0 | 0.0 |
| LLANENKH_76 | 1.0 | 0.0 | 1.0 |
| LLANENKH_77 | 0.0 | 1.0 | 0.0 |
| LLANENKH_78 | 0.0 | 1.0 | 0.0 |
| LLANENKH_79 | 0.0 | 1.0 | 0.0 |
| LLANENKH_80 | 0.0 | 1.0 | 0.0 |
| LLANENKH_81 | 0.0 | 1.0 | 0.0 |
| LLANENKH_82 | 0.0 | 1.0 | 0.0 |
| LLANENKH_83 | 0.0 | 1.0 | 0.0 |
| LLANENKH_84 | 0.0 | 1.0 | 0.0 |
| LLANENKH_85 | 0.0 | 1.0 | 0.0 |
| LLANENKH_86 | 0.0 | 1.0 | 0.0 |
| LLANENKH_87 | 0.0 | 1.0 | 0.0 |
| LLANENKH_88 | 0.0 | 1.0 | 0.0 |
| LLANENKH_89 | 0.0 | 1.0 | 0.0 |
| LLANENKH_90 | 0.0 | 1.0 | 0.0 |
| LLANENKH_91 | 0.0 | 1.0 | 0.0 |
| LLANENKH_92 | 1.0 | 0.0 | 1.0 |
| LLANENKH_93 | 0.0 | 1.0 | 0.0 |
| LLANENKH_94 | 0.0 | 1.0 | 0.0 |
| LLANENKH_95 | 0.0 | 1.0 | 0.0 |
| LLANENKH_96 | 0.0 | 1.0 | 0.0 |
| LLANENKH_97 | 0.0 | 1.0 | 0.0 |
| LLANENKH_98 | 1.0 | 0.0 | 1.0 |
| LLANENKH_99 | 0.0 | 1.0 | 0.0 |
| LLANENKH_100 | 0.0 | 1.0 | 0.0 |
| LLANENKH_101 | 0.0 | 1.0 | 0.0 |
| LLANENKH_102 | 0.0 | 1.0 | 0.0 |
| LLANENKH_103 | 0.0 | 1.0 | 0.0 |
| LLANENKH_104 | 0.0 | 1.0 | 0.0 |
| LLANENKH_105 | 0.0 | 1.0 | 0.0 |
| LLANENKH_106 | 0.0 | 1.0 | 0.0 |
| LLANENKH_107 | 1.0 | 0.0 | 1.0 |
| LLANENKH_108 | 0.0 | 1.0 | 0.0 |
| LLANENKH_109 | 1.0 | 0.0 | 1.0 |
| LLANENKH_110 | 0.0 | 1.0 | 0.0 |
| LLANENKH_111 | 0.0 | 1.0 | 0.0 |
| LLANENKH_112 | 0.0 | 1.0 | 0.0 |
| LLANENKH_113 | 0.0 | 1.0 | 0.0 |
| LLANENKH_114 | 0.0 | 1.0 | 0.0 |
| LLANENKH_115 | 0.0 | 1.0 | 0.0 |
| LLANENKH_116 | 0.0 | 1.0 | 0.0 |
| LLANENKH_117 | 0.0 | 1.0 | 0.0 |
| LLANENKH_118 | 0.0 | 1.0 | 0.0 |
| LLANENKH_119 | 1.0 | 0.0 | 1.0 |
| LLANENKH_120 | 0.0 | 1.0 | 0.0 |
| LLANENKH_121 | 0.0 | 1.0 | 0.0 |
| LLANENKH_122 | 0.0 | 1.0 | 0.0 |
| LLANENKH_123 | 1.0 | 0.0 | 1.0 |
| LLANENKH_124 | 0.0 | 1.0 | 0.0 |
| LLANENKH_125 | 1.0 | 0.0 | 1.0 |
| LLANENKH_126 | 1.0 | 0.0 | 1.0 |
| LLANENKH_127 | 0.0 | 1.0 | 0.0 |
| LLANENKH_128 | 0.0 | 1.0 | 0.0 |
| LLANENKH_129 | 0.0 | 1.0 | 0.0 |
| LLANENKH_130 | 0.0 | 1.0 | 0.0 |
| LLANENKH_131 | 0.0 | 1.0 | 0.0 |
| LLANENKH_132 | 0.0 | 1.0 | 0.0 |
| LLANENKH_133 | 0.0 | 1.0 | 0.0 |
| LLANENKH_134 | 0.0 | 1.0 | 0.0 |
| LLANENKH_135 | 0.0 | 1.0 | 0.0 |
| LLANENKH_136 | 1.0 | 0.0 | 1.0 |
| LLANENKH_137 | 0.0 | 1.0 | 0.0 |
| LLANENKH_138 | 0.0 | 1.0 | 0.0 |
| LLANENKH_139 | 0.0 | 1.0 | 0.0 |
| LLANENKH_140 | 1.0 | 0.0 | 1.0 |
| LLANENKH_141 | 0.0 | 1.0 | 0.0 |
| LLANENKH_142 | 0.0 | 1.0 | 0.0 |
| LLANENKH_143 | 0.0 | 1.0 | 0.0 |
| LLANENKH_144 | 1.0 | 0.0 | 1.0 |
| LLANENKH_145 | 0.0 | 1.0 | 0.0 |
| LLANENKH_146 | 0.0 | 1.0 | 0.0 |
| LLANENKH_147 | 0.0 | 1.0 | 0.0 |
| LLANENKH_148 | 0.0 | 1.0 | 0.0 |
| LLANENKH_149 | 1.0 | 0.0 | 1.0 |
| LLANENKH_150 | 0.0 | 1.0 | 0.0 |
| LLANENKH_151 | 0.0 | 1.0 | 0.0 |
| LLANENKH_152 | 1.0 | 0.0 | 1.0 |
| LLANENKH_153 | 1.0 | 0.0 | 1.0 |
| LLANENKH_154 | 1.0 | 0.0 | 1.0 |
| LLANENKH_155 | 0.0 | 1.0 | 0.0 |
| LLANENKH_156 | 0.0 | 1.0 | 0.0 |
| LLANENKH_157 | 0.0 | 1.0 | 0.0 |
| LLANENKH_158 | 0.0 | 1.0 | 0.0 |
| LLANENKH_159 | 1.0 | 0.0 | 1.0 |
| LLANENKH_160 | 1.0 | 0.0 | 1.0 |
| LLANENKH_161 | 1.0 | 0.0 | 1.0 |
| LLANENKH_162 | 1.0 | 0.0 | 1.0 |
| LLANENKH_163 | 0.0 | 1.0 | 0.0 |
| LLANENKH_164 | 1.0 | 0.0 | 1.0 |
| LLANENKH_165 | 0.0 | 1.0 | 0.0 |
| LLANENKH_166 | 1.0 | 0.0 | 1.0 |
| LLANENKH_167 | 0.0 | 1.0 | 0.0 |
| LLANENKH_168 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LLANENKH_115 | 2549 | 11745 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)