Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KNBAMPMO_109 | 42149 | 43039 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
| KNBAMPMO_159 | 9219 | 11135 | tet(Q) | ARO:3000191 | tet(Q) | 96.39 | 97.11 | Z21523.1 |
| KNBAMPMO_35 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| KNBAMPMO_132 | 92 | 1852 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KNBAMPMO_35 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| KNBAMPMO_35 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| KNBAMPMO_159 | 9219 | 11137 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 99.64 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KNBAMPMO_35 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| KNBAMPMO_35 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| KNBAMPMO_109 | 42149 | 43036 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| KNBAMPMO_159 | 9222 | 11135 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 99.53 | WP_063856407.1 |
| KNBAMPMO_132 | 71 | 1852 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KNBAMPMO_38 | 39 | 718 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KNBAMPMO_1 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_2 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_3 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_4 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_5 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_7 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_8 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_9 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_10 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_11 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_12 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_13 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_14 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_15 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_16 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_17 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_18 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_19 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_20 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_21 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_22 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_23 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_24 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_25 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_26 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_27 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_28 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_29 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_30 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_31 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_32 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_33 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_34 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_35 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_36 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_37 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_38 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_39 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_40 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_41 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_42 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_43 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_44 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_45 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_46 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_47 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_48 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_49 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_50 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_51 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_52 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_53 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_54 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_55 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_56 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_57 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_58 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_59 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_60 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_61 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_62 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_63 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_64 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_65 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_66 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_67 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_68 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_69 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_70 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_71 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_72 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_73 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_74 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_75 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_76 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_77 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_78 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_79 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_80 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_81 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_82 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_83 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_84 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_85 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_86 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_87 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_88 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_89 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_90 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_91 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_92 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_93 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_94 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_95 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_96 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_97 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_98 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_99 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_100 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_101 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_102 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_103 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_104 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_105 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_106 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_107 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_108 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_109 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_110 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_111 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_112 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_113 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_114 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_115 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_116 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_117 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_118 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_119 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_120 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_121 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_122 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_123 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_124 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_125 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_126 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_127 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_128 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_129 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_130 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_131 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_132 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_133 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_134 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_135 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_136 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_137 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_138 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_139 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_140 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_141 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_142 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_143 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_144 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_145 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_146 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_147 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_148 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_149 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_150 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_151 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_152 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_153 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_154 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_155 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_156 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_157 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_158 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_159 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_160 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_161 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_162 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_163 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_164 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_165 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_166 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_167 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_168 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_169 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_170 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_171 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_172 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_173 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_174 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_175 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_176 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_177 | 0.0 | 1.0 | 0.0 |
| KNBAMPMO_178 | 1.0 | 0.0 | 1.0 |
| KNBAMPMO_179 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KNBAMPMO_131 | 2549 | 11745 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)